RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	MCM3	P25205	808 aa		15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	MUM1L1	Q5H9M0	696 aa		15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	CCDC70	Q6NSX1	233 aa		15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	IRF2BP1	Q8IU81	584 aa		15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	CCDC24	Q8N4L8	307 aa		15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	BBX	Q8WY36	941 aa	Predicted RBP	15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	REXO2	Q9Y3B8	237 aa	Known RBP	15.04	■□□□□ -0
SUPT20H-222	ENST00000495071	SHANK3	Q9BYB0	1731 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	TSPY3	P0CV98	308 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	TSPY8	P0CW00	308 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	CKAP4	Q07065	602 aa	Known RBP	15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	SPA17	Q15506	151 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	C10orf67	Q8IYJ2	551 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	CRACR2A	Q9BSW2	395 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	THAP9	Q9H5L6	903 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	IDE	P14735	1019 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	LETM2	Q2VYF4	491 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	FKBP15	Q5T1M5	1219 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	ZNF444	Q8N0Y2	327 aa	Predicted RBP	15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	FAM71B	Q8TC56	605 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	DYNLL2	Q96FJ2	89 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	DRC1	Q96MC2	740 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	MMS19	Q96T76	1030 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	NOC4L	Q9BVI4	516 aa	Known RBP	15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	TSPYL1	Q9H0U9	437 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	AGPAT5	Q9NUQ2	364 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	PSD3	Q9NYI0	1048 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	FGR	P09769	529 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	GNAQ	P50148	359 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	CYP27A1	Q02318	531 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	KIF5A	Q12840	1032 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	GPIHBP1	Q8IV16	184 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071	CAPN11	Q9UMQ6	739 aa		15.03	■□□□□ -0
SUPT20H-222	ENST00000495071		A0A1W2PQC6	194 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	ADAMTS2	O95450	1211 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	AMPD2	Q01433	879 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	CCDC96	Q2M329	555 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	CABP7	Q86V35	215 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	HINFP	Q9BQA5	517 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	DEF6	Q9H4E7	631 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	SLIT2	O94813	1529 aa		15.02	■□□□□ -0
SUPT20H-222	ENST00000495071	LRRIQ3	A6PVS8	624 aa	Predicted RBP	15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	GOLGA8H	P0CJ92	632 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	FAM114A1	Q8IWE2	563 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	CCDC42	Q96M95	316 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	FAM204A	Q9H8W3	233 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	MYH8	P13535	1937 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	COL1A1	P02452	1464 aa	Predicted RBP	15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	BICDL2	A1A5D9	508 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	USP17L3	A6NCW0	530 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	USP17L4	A6NCW7	530 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	PSMD14	O00487	310 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	IVL	P07476	585 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	NAPA	P54920	295 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	RPS8	P62241	208 aa	Known RBP	15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	HERVK_113	P62684	666 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	USP17L1	Q7RTZ2	530 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	TRAPPC11	Q7Z392	1133 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	CNOT6L	Q96LI5	555 aa	Known RBP	15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	DNAJC7	Q99615	494 aa		15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	15.02	□□□□□ -0.01
SUPT20H-222	ENST00000495071	BAZ2A	Q9UIF9	1905 aa	Known RBP	15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	LRP5	O75197	1615 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	CCNT1	O60563	726 aa	Known RBP	15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	PLCG1	P19174	1290 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	KLK7	P49862	253 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	USP14	P54578	494 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	NAALADL2	Q58DX5	795 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	NOC3L	Q8WTT2	800 aa	Known RBP	15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	NUP58	Q9BVL2	599 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	VAT1L	Q9HCJ6	419 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	ANKRD36C	Q5JPF3	1778 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	PDS5A	Q29RF7	1337 aa	Known RBP	15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	DUOX1	Q9NRD9	1551 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	KCNB1	Q14721	858 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	RCSD1	Q6JBY9	416 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	TYW1B	Q6NUM6	668 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	C4orf32	Q8N8J7	132 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	MED4	Q9NPJ6	270 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	KCNQ4	P56696	695 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	P2RX5	Q93086	422 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	PCDHA6	Q9UN73	950 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	PCDHA8	Q9Y5H6	950 aa		15.01	□□□□□ -0.01
SUPT20H-222	ENST00000495071	MATR3	P43243	847 aa	Known RBP eCLIP	15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	SOGA3	Q5TF21	947 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	IQCE	Q6IPM2	695 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	WDR59	Q6PJI9	974 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	GIMAP8	Q8ND71	665 aa	Predicted RBP	15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	DHTKD1	Q96HY7	919 aa	Predicted RBP	15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	NLRP3	Q96P20	1036 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	CPVL	Q9H3G5	476 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	SH3GLB2	Q9NR46	395 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	TMEM51	Q9NW97	253 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	DOCK2	Q92608	1830 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	VGLL3	A8MV65	326 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	RNF40	O75150	1001 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	RHOBTB3	O94955	611 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	WDR93	Q6P2C0	686 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	FBXO33	Q7Z6M2	555 aa		15	□□□□□ -0.01
SUPT20H-222	ENST00000495071	SMARCC1	Q92922	1105 aa	Predicted RBP	15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms