RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SEPT4O43236 478 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 KDM4AO75164 1064 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 SNAI1O95863 264 aaPredicted RBP12.52□□□□□ -0.41
NELFE-213ENST00000494956 ALAS1P13196 640 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
NELFE-213ENST00000494956 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
NELFE-213ENST00000494956 PTH1RQ03431 593 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 TICAM2Q86XR7 235 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
NELFE-213ENST00000494956 CPVLQ9H3G5 476 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 RNF146Q9NTX7 359 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 TCP11L1Q9NUJ3 509 aa12.52□□□□□ -0.41
NELFE-213ENST00000494956 HIP1O00291 1037 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 PGK1P00558 417 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
NELFE-213ENST00000494956 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 PDHBP11177 359 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 TOP1P11387 765 aaKnown RBP12.51□□□□□ -0.41
NELFE-213ENST00000494956 CAPN2P17655 700 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 CHMLP26374 656 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 COPB2P35606 906 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 FXR1P51114 621 aaKnown RBP eCLIP12.51□□□□□ -0.41
NELFE-213ENST00000494956 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 DSCC1Q9BVC3 393 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 PRO3102Q9H379 93 aa12.51□□□□□ -0.41
NELFE-213ENST00000494956 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
NELFE-213ENST00000494956 ADCY6O43306 1168 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 MSCO60682 206 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 PLA2G6O60733 806 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 PTGS1P23219 599 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 OAZ1P54368 228 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
NELFE-213ENST00000494956 LRRC41Q15345 812 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 CHST13Q8NET6 341 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 ESR2Q92731 530 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 A1CFQ9NQ94 594 aaKnown RBP12.5□□□□□ -0.41
NELFE-213ENST00000494956 ZHX1Q9UKY1 873 aaPredicted RBP12.5□□□□□ -0.41
NELFE-213ENST00000494956 TAF6LQ9Y6J9 622 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 TRIOBPQ9H2D6 2365 aa12.5□□□□□ -0.41
NELFE-213ENST00000494956 ASTN1O14525 1302 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 DNM1LO00429 736 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 IMMTQ16891 758 aaKnown RBP12.49□□□□□ -0.41
NELFE-213ENST00000494956 SYDE2Q5VT97 1194 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 ARMCX2Q7L311 632 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 UBA5Q9GZZ9 404 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
NELFE-213ENST00000494956 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
NELFE-213ENST00000494956 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
NELFE-213ENST00000494956 ZSWIM5Q9P217 1185 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
NELFE-213ENST00000494956 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 MYADML2A6NDP7 307 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 ADCYAP1R1P41586 468 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 MAGEA10P43363 369 aaPredicted RBP12.48□□□□□ -0.41
NELFE-213ENST00000494956 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 BTNL9Q6UXG8 535 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 NSMFQ6X4W1 530 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
NELFE-213ENST00000494956 CCDC144CPQ8IYA2 1237 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 FAM133AQ8N9E0 248 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 XPNPEP3Q9NQH7 507 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 FBXO40Q9UH90 709 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
NELFE-213ENST00000494956 TNKSO95271 1327 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 SYNGAP1Q96PV0 1343 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.47□□□□□ -0.41
NELFE-213ENST00000494956 KBTBD13C9JR72 458 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 NFIBO00712 420 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 ICAM1P05362 532 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 CYP21A2P08686 494 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 FDX1P10109 184 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 RARBP10826 455 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 PCP11498 1178 aaKnown RBP12.47□□□□□ -0.41
NELFE-213ENST00000494956 AKR1A1P14550 325 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 RTP1P59025 263 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 MDM2Q00987 491 aaPredicted RBP12.47□□□□□ -0.41
NELFE-213ENST00000494956 ACVR2BQ13705 512 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 TMEM63BQ5T3F8 832 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 SLC39A5Q6ZMH5 540 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
NELFE-213ENST00000494956 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 TTC14Q96N46 770 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
NELFE-213ENST00000494956 GDF15Q99988 308 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 ATP11BQ9Y2G3 1177 aa12.47□□□□□ -0.41
NELFE-213ENST00000494956 MYH6P13533 1939 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms