RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 CLIC6Q96NY7 704 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
HDLBP-245ENST00000494862 BAZ2BQ9UIF8 2168 aaKnown RBP13.13□□□□□ -0.31
HDLBP-245ENST00000494862 A0A1W2PRG0 241 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 ZBTB5O15062 677 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 ZNF202O95125 648 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 SLC16A2P36021 539 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 SYKP43405 635 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 TYRO3Q06418 890 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 APOBEC3FQ8IUX4 373 aaKnown RBP13.12□□□□□ -0.31
HDLBP-245ENST00000494862 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 RASGRP4Q8TDF6 673 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 SYT17Q9BSW7 474 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
HDLBP-245ENST00000494862 MYH4Q9Y623 1939 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 WNT7AO00755 349 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 RAD21O60216 631 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 ASNSP08243 561 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 ADCY7P51828 1080 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-245ENST00000494862 UVSSAQ2YD98 709 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 COA7Q96BR5 231 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 DEFB129Q9H1M3 183 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
HDLBP-245ENST00000494862 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-245ENST00000494862 PPP1R11O60927 126 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-245ENST00000494862 PTGDRQ13258 359 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 NONOQ15233 471 aaKnown RBP eCLIP13.1□□□□□ -0.31
HDLBP-245ENST00000494862 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-245ENST00000494862 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
HDLBP-245ENST00000494862 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-245ENST00000494862 PANK2Q9BZ23 570 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 CEP350Q5VT06 3117 aa13.1□□□□□ -0.31
HDLBP-245ENST00000494862 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 PLA2G6O60733 806 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 MCM7P33993 719 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 ECE1P42892 770 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
HDLBP-245ENST00000494862 GRIN1Q05586 938 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-245ENST00000494862 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-245ENST00000494862 INF2Q27J81 1249 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
HDLBP-245ENST00000494862 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
HDLBP-245ENST00000494862 CSRNP2Q9H175 543 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 PPP2R3BQ9Y5P8 575 aa13.09□□□□□ -0.31
HDLBP-245ENST00000494862 LAD1O00515 517 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
HDLBP-245ENST00000494862 CAVIN2O95810 425 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-245ENST00000494862 ANGEL2Q5VTE6 544 aaKnown RBP13.08□□□□□ -0.32
HDLBP-245ENST00000494862 JAKMIP3Q5VZ66 844 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 CUL5Q93034 780 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 RNF181Q9P0P0 153 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.32
HDLBP-245ENST00000494862 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-245ENST00000494862 SCAF8Q9UPN6 1271 aaKnown RBP13.08□□□□□ -0.32
HDLBP-245ENST00000494862 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
HDLBP-245ENST00000494862 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDLBP-245ENST00000494862 EPS15P42566 896 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 CLK2P49760 499 aaKnown RBP13.07□□□□□ -0.32
HDLBP-245ENST00000494862 TRAF1Q13077 416 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 STX1AQ16623 288 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 SPECC1Q5M775 1068 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 NBPF12Q5TAG4 269 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-245ENST00000494862 POTEHQ6S545 545 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 CNNM3Q8NE01 707 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 FAM200AQ8TCP9 573 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 AMNQ9BXJ7 453 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 ZNF112Q9UJU3 913 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms