RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 GINM1Q9NU53 330 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 EFR3BQ9Y2G0 817 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 PCDHB14Q9Y5E9 798 aa6.98□□□□□ -1.29
SMC4-224ENST00000494612 ADAMTS20P59510 1910 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 RAG1P15918 1043 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 NASPP49321 788 aaPredicted RBP6.97□□□□□ -1.29
SMC4-224ENST00000494612 CWF19L2Q2TBE0 894 aaKnown RBP6.97□□□□□ -1.29
SMC4-224ENST00000494612 ZPBP2Q6X784 338 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 CEP128Q6ZU80 1094 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 VPS37DQ86XT2 251 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 PLCD4Q9BRC7 762 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 CNNM2Q9H8M5 875 aa6.97□□□□□ -1.29
SMC4-224ENST00000494612 SYPP08247 313 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 POLR2BP30876 1174 aaKnown RBP6.96□□□□□ -1.3
SMC4-224ENST00000494612 VIPR1P32241 457 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 EPHB3P54753 998 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 CHMP4BP1P59074 171 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 ARID5AQ03989 594 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 GK5Q6ZS86 529 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.3
SMC4-224ENST00000494612 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 IRS4O14654 1257 aaPredicted RBP6.95□□□□□ -1.3
SMC4-224ENST00000494612 N4BP3O15049 544 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 SIGLEC6O43699 453 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 PRAMEF1O95521 474 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 SDHBP21912 280 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 GJA8P48165 433 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 CEBPAP49715 358 aaPredicted RBP6.95□□□□□ -1.3
SMC4-224ENST00000494612 RTP1P59025 263 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 CCDC81Q6ZN84 652 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 ATG4CQ96DT6 458 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 TEPSINQ96N21 525 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMC4-224ENST00000494612 TNFRSF10DQ9UBN6 386 aa6.95□□□□□ -1.3
SMC4-224ENST00000494612 SSU72P8A0A1W2PR75 194 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 FKTNO75072 461 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
SMC4-224ENST00000494612 GTF2F1P35269 517 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMC4-224ENST00000494612 CCNFP41002 786 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 PLP2Q04941 152 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 KIR3DS1Q14943 382 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 SREK1Q8WXA9 508 aaKnown RBP6.94□□□□□ -1.3
SMC4-224ENST00000494612 PPT2Q9UMR5 302 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 MINPP1Q9UNW1 487 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
SMC4-224ENST00000494612 INSRRP14616 1297 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 CLCQ05315 142 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 TMEFF1Q8IYR6 380 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 SLC43A3Q8NBI5 491 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 CPLX3Q8WVH0 158 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 FCRL2Q96LA5 508 aaPredicted RBP6.93□□□□□ -1.3
SMC4-224ENST00000494612 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 KLHL14Q9P2G3 628 aa6.93□□□□□ -1.3
SMC4-224ENST00000494612 ZC3H12DA2A288 527 aaKnown RBP6.92□□□□□ -1.3
SMC4-224ENST00000494612 ABLIM1O14639 778 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 SSBP05455 408 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMC4-224ENST00000494612 ATP2B1P20020 1258 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 CDR1P51861 262 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 EFEMP1Q12805 493 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMC4-224ENST00000494612 HSF5Q4G112 596 aaPredicted RBP6.92□□□□□ -1.3
SMC4-224ENST00000494612 GALNT18Q6P9A2 607 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 MCF2L2Q86YR7 1114 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 TMEM192Q8IY95 271 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 REXO1Q8N1G1 1221 aaKnown RBP6.92□□□□□ -1.3
SMC4-224ENST00000494612 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 CHST7Q9NS84 486 aa6.92□□□□□ -1.3
SMC4-224ENST00000494612 WTIPA6NIX2 430 aaPredicted RBP6.91□□□□□ -1.3
SMC4-224ENST00000494612 CLEC3AO75596 197 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 CTSKP43235 329 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 VMACQ2NL98 169 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 SLITRK4Q8IW52 837 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 RASGRP4Q8TDF6 673 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 ZNF512BQ96KM6 892 aaPredicted RBP6.91□□□□□ -1.3
SMC4-224ENST00000494612 FERD3LQ96RJ6 166 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 GPR20Q99678 358 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 ADAM7Q9H2U9 754 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 ERVK13-1Q9NX77 482 aa6.91□□□□□ -1.3
SMC4-224ENST00000494612 ZNF205O95201 554 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 MPOP05164 745 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 BMP8BP34820 402 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
SMC4-224ENST00000494612 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 IGDCC3Q8IVU1 814 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 DNAJC2Q99543 621 aaKnown RBP6.9□□□□□ -1.3
SMC4-224ENST00000494612 BDH2Q9BUT1 245 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 ANTXR1Q9H6X2 564 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.3
SMC4-224ENST00000494612 ACSL6Q9UKU0 697 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 MYRFQ9Y2G1 1151 aa6.9□□□□□ -1.3
SMC4-224ENST00000494612 GPR55Q9Y2T6 319 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms