RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 NDUFB10O96000 172 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 COL9A1P20849 921 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 RASA1P20936 1047 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 CYP2C18P33260 490 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 CDK7P50613 346 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 KLRC3Q07444 240 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 ACVR2BQ13705 512 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 CCDC144BQ3MJ40 725 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 TJAP1Q5JTD0 557 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 MFSD5Q6N075 450 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 CCDC129Q6ZRS4 1044 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 KIFC2Q96AC6 838 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 VTI1AQ96AJ9 217 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 TOX2Q96NM4 488 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 TSEN34Q9BSV6 310 aaKnown RBP13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 OSBPL3Q9H4L5 887 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 NCOR1O75376 2440 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 TMEM265A0A087WTH1 108 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 PRDM1O75626 825 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 ATP5JP18859 108 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 CNTN2Q02246 1040 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 NUP133Q8WUM0 1156 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 HAUS7Q99871 368 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 TEX13BQ9BXU2 312 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 HOMER2Q9NSB8 354 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 CLIP2Q9UDT6 1046 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 YBX2Q9Y2T7 364 aaKnown RBP13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
CSNK1E-212ENST00000494610 ASTN1O14525 1302 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 SYNGAP1Q96PV0 1343 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 TCF20Q9UGU0 1960 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 MOXD2PA6NHM9 499 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 MINDY4BA8MYZ0 360 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 TNFRSF10AO00220 468 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 MYOGP15173 224 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 PDE4AP27815 886 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 SNAP25P60880 206 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 BMP2KLQ5H9B9 411 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 RASIP1Q5U651 963 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 PLEKHM2Q8IWE5 1019 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 FAM126BQ8IXS8 530 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 GLT1D1Q96MS3 346 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 NECAB3Q96P71 396 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 KATNBL1Q9H079 304 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 NKX2-4Q9H2Z4 354 aa13.97□□□□□ -0.17
CSNK1E-212ENST00000494610 SALL3Q9BXA9 1300 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 ARVCFO00192 962 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 IGFBP4P22692 258 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 RABGGTBP53611 331 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 PDE1AP54750 535 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 CCL23P55773 120 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 UBE3CQ15386 1083 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 GNASQ5JWF2 1037 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 ARMCX2Q7L311 632 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 CCDC144CPQ8IYA2 1237 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 STRBPQ96SI9 672 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 EPB41L4AQ9HCS5 686 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 ECHDC1Q9NTX5 307 aa13.96□□□□□ -0.17
CSNK1E-212ENST00000494610 GRIN2DO15399 1336 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 IGKV6D-41A0A0C4DH26 115 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 GJA9P57773 515 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 CXCL17Q6UXB2 119 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 OTOP2Q7RTS6 562 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 AMOTL1Q8IY63 956 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 PPP1R13LQ8WUF5 828 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 OSBP2Q969R2 916 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 TRPV6Q9H1D0 765 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 MKNK2Q9HBH9 465 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 PDGFCQ9NRA1 345 aa13.95□□□□□ -0.18
CSNK1E-212ENST00000494610 ELP1O95163 1332 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 ZBED4O75132 1171 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 CD4P01730 458 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 CST5P28325 142 aaPredicted RBP13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 PSMC6P62333 389 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 PPIGQ13427 754 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■□□□ 12.6
CSNK1E-212ENST00000494610 ADAMTS19Q8TE59 1207 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 VWCEQ96DN2 955 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 CEP95Q96GE4 821 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 AGBL1Q96MI9 1066 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 ASB2Q96Q27 587 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 GAS2L1Q99501 681 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms