RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 RNMTO43148 476 aaKnown RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 PTCD1O75127 700 aaKnown RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 CDKL5O76039 1030 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 TNFRSF8P28908 595 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 PMS1P54277 932 aaKnown RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 SCARF1Q14162 830 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 IQCEQ6IPM2 695 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 CCDC82Q8N4S0 544 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 OR2W6PQ8NHA6 318 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF570Q96NI8 536 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 GSDMAQ96QA5 445 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 METTL22Q9BUU2 404 aaPredicted RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 EBF2Q9HAK2 575 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 BAIAP2L1Q9UHR4 511 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 SLC12A6Q9UHW9 1150 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 SH3BP1Q9Y3L3 701 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 GMNCA6NCL1 334 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 GOLGA8AA7E2F4 631 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 ZBTB43O43298 467 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 UPP2O95045 317 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 SLC8A1P32418 973 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 KRT83P78385 493 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 ITIH3Q06033 890 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 LACTB2Q53H82 288 aaPredicted RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 CD302Q8IX05 232 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
LINC00488-201ENST00000494582 CCT6BQ92526 530 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 TTYH3Q9C0H2 523 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 GDF3Q9NR23 364 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 RWDD2AQ9UIY3 292 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 SALL4Q9UJQ4 1053 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 GDAQ9Y2T3 454 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 DIP2AQ14689 1571 aa11.27□□□□□ -0.6
LINC00488-201ENST00000494582 STK36Q9NRP7 1315 aa11.27□□□□□ -0.6
LINC00488-201ENST00000494582 SF3A3Q12874 501 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 AP1ARQ63HQ0 302 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 PPP4R3AQ6IN85 833 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 C8orf74Q6P047 294 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 CASKIN2Q8WXE0 1202 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 RUBCNQ92622 972 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 CUL5Q93034 780 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 SH3GL3Q99963 347 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 LY9Q9HBG7 655 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 LRRC4CQ9HCJ2 640 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 EPB41L5Q9HCM4 733 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 SPATS2LQ9NUQ6 558 aaKnown RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 PLAAQ9Y263 795 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 ZPR1O75312 459 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 GUCY2DQ02846 1103 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 ICA1Q05084 483 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 PAK1Q13153 545 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 GLE1Q53GS7 698 aaKnown RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 THEMIS2Q5TEJ8 643 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 HIBCHQ6NVY1 386 aaPredicted RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 HOOK2Q96ED9 719 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 TMBIM4Q9HC24 238 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00488-201ENST00000494582 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
LINC00488-201ENST00000494582 WDR19Q8NEZ3 1342 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 LGALS16A8MUM7 142 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 DCDC2CA8MYV0 355 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 F8W031 263 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 H7C1W4 665 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 PPIP5K2O43314 1243 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 ANP32DO95626 131 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 ADORA1P30542 326 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 VAV2P52735 878 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 CASP7P55210 303 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 SSRP1Q08945 709 aaKnown RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 MIS18BP1Q6P0N0 1132 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 RAPGEF5Q92565 580 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 RSRC1Q96IZ7 334 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms