RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 REXO1Q8N1G1 1221 aaKnown RBP18.82■□□□□ 0.6
ATG4B-225ENST00000494465 AOPEPQ8N6M6 819 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 VEZTQ9HBM0 779 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 ZBTB5O15062 677 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 NONOQ15233 471 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■■■□□ 14.8
ATG4B-225ENST00000494465 ZRSR1Q15695 479 aaKnown RBP18.81■□□□□ 0.6
ATG4B-225ENST00000494465 NBPF9Q3BBW0 867 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 ISM2Q6H9L7 571 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 PPP1R18Q6NYC8 613 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 FAM83AQ86UY5 434 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 PLA2G4DQ86XP0 818 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 GRAMD1CQ8IYS0 662 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 TMEM39BQ9GZU3 492 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 BIN2Q9UBW5 565 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-225ENST00000494465 BCS1LQ9Y276 419 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 F5H6K3 240 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 BMP6P22004 513 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 SARSP49591 514 aaKnown RBP18.81■□□□□ 0.6
ATG4B-225ENST00000494465 PRELPP51888 382 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 KLRC3Q07444 240 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 DHX58Q96C10 678 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 MYOZ2Q9NPC6 264 aa18.81■□□□□ 0.6
ATG4B-225ENST00000494465 LTBP3Q9NS15 1303 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 UTRNP46939 3433 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 NDUFB10O96000 172 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 SLFN14P0C7P3 912 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 ADCY7P51828 1080 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 SARM1Q6SZW1 724 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 SH3RF1Q7Z6J0 888 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 SPATA20Q8TB22 786 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 GMCL1Q96IK5 515 aa18.8■□□□□ 0.6
ATG4B-225ENST00000494465 HOOK1Q9UJC3 728 aaKnown RBP18.8■□□□□ 0.6
ATG4B-225ENST00000494465 LONP1P36776 959 aaKnown RBP18.79■□□□□ 0.6
ATG4B-225ENST00000494465 E2F4Q16254 413 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 JAKMIP3Q5VZ66 844 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 KANK3Q6NY19 840 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 RIC8AQ9NPQ8 531 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 BECN2A8MW95 431 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 EDIL3O43854 480 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 RAD21O60216 631 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 TBC1D12O60347 775 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 ZNF75DP51815 510 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 ZNF280AP59817 542 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-225ENST00000494465 NCAPHQ15003 741 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 TBCKQ8TEA7 893 aa18.79■□□□□ 0.6
ATG4B-225ENST00000494465 PSDA5PKW4 1024 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-225ENST00000494465 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
ATG4B-225ENST00000494465 CLK2P49760 499 aaKnown RBP18.78■□□□□ 0.6
ATG4B-225ENST00000494465 TNIP1Q15025 636 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 NEK8Q86SG6 692 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 NUP88Q99567 741 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-225ENST00000494465 MAN1B1Q9UKM7 699 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 SYNPO2Q9UMS6 1093 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 LAD1O00515 517 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 EGFRP00533 1210 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 RASSF7Q02833 373 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 QRICH1Q2TAL8 776 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 LETM2Q2VYF4 491 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 ZKSCAN5Q9Y2L8 839 aa18.78■□□□□ 0.6
ATG4B-225ENST00000494465 MYH7BA7E2Y1 1941 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 MYO1BO43795 1136 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 PRPHP41219 470 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 UPF1Q92900 1129 aaKnown RBP eCLIP18.77■□□□□ 0.6
ATG4B-225ENST00000494465 PAGE5Q96GU1 130 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 TRIM5Q9C035 493 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 CCNT1O60563 726 aaKnown RBP18.77■□□□□ 0.6
ATG4B-225ENST00000494465 MAP3K10Q02779 954 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 DTHD1Q6ZMT9 781 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 ZBTB21Q9ULJ3 1066 aa18.77■□□□□ 0.6
ATG4B-225ENST00000494465 ECE1P42892 770 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 CDC37Q16543 378 aaPredicted RBP18.76■□□□□ 0.59
ATG4B-225ENST00000494465 PDXDC2PQ6P474 469 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 NLGN2Q8NFZ4 835 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 RPS12P25398 132 aaKnown RBP18.76■□□□□ 0.59
ATG4B-225ENST00000494465 CDC25AP30304 524 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 MORC3Q14149 939 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 UBE2SQ16763 222 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 KIAA1755Q5JYT7 1200 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 MIGA2Q7L4E1 593 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 ACER1Q8TDN7 264 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 SMARCE1Q969G3 411 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 HSD3B7Q9H2F3 369 aa18.76■□□□□ 0.59
ATG4B-225ENST00000494465 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
ATG4B-225ENST00000494465 FZD9O00144 591 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 IKBKBO14920 756 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 NEMFO60524 1076 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 CLCN1P35523 988 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 MMP14P50281 582 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 ORC2Q13416 577 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-225ENST00000494465 BTNL9Q6UXG8 535 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 CUL5Q93034 780 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 TMX2Q9Y320 296 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 ATAD5Q96QE3 1844 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 OR52Z1P0C646 297 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 BMP3P12645 472 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 AFMP43652 599 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms