RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SYNGAP1Q96PV0 1343 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 LRRC37A2A6NM11 1700 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 KDM4AO75164 1064 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 ANP32AP39687 249 aaKnown RBP15.49■□□□□ 0.07
ERCC3-209ENST00000494464 MAMDC4Q6UXC1 1216 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 DDX11Q96FC9 970 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 KRT23Q9C075 422 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 RANBP17Q9H2T7 1088 aaKnown RBP15.49■□□□□ 0.07
ERCC3-209ENST00000494464 ACAD9Q9H845 621 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 CNNM2Q9H8M5 875 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 B4E1Z4 1266 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 DNM1LO00429 736 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 SGSM2O43147 1006 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 EVI5O60447 810 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 ZNF543Q08ER8 600 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 SYDE2Q5VT97 1194 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 ANKRD35Q8N283 1001 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 ANKS1AQ92625 1134 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 RNF146Q9NTX7 359 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 MTMR7Q9Y216 660 aa15.49■□□□□ 0.07
ERCC3-209ENST00000494464 LCTP09848 1927 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 ICAM1P05362 532 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 GPATCH4Q5T3I0 446 aaKnown RBP15.48■□□□□ 0.07
ERCC3-209ENST00000494464 CHMP4CQ96CF2 233 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 FGD4Q96M96 766 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 ZKSCAN3Q9BRR0 538 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 HOMER2Q9NSB8 354 aa15.48■□□□□ 0.07
ERCC3-209ENST00000494464 MCM3APO60318 1980 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 ZNF865P0CJ78 1059 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-209ENST00000494464 PRAMEF19Q5SWL8 479 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 TTBK2Q6IQ55 1244 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 PNMA1Q8ND90 353 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-209ENST00000494464 A1CFQ9NQ94 594 aaKnown RBP15.47■□□□□ 0.07
ERCC3-209ENST00000494464 ZSWIM5Q9P217 1185 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 CNPY2Q9Y2B0 182 aa15.47■□□□□ 0.07
ERCC3-209ENST00000494464 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
ERCC3-209ENST00000494464 TNKSO95271 1327 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 FRMPD2Q68DX3 1309 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-209ENST00000494464 CEP290O15078 2479 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 ALAS1P13196 640 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 AKR1A1P14550 325 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 SLC16A2P36021 539 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 PTH1RQ03431 593 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
ERCC3-209ENST00000494464 FAM133AQ8N9E0 248 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 ARRDC4Q8NCT1 418 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 TRERF1Q96PN7 1200 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 GPCPD1Q9NPB8 672 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
ERCC3-209ENST00000494464 WDR19Q8NEZ3 1342 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 SMCHD1A6NHR9 2005 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 SNAI1O95863 264 aaPredicted RBP15.45■□□□□ 0.06
ERCC3-209ENST00000494464 CYP21A2P08686 494 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 RARBP10826 455 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 SNAP25P60880 206 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 ANO1Q5XXA6 986 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 UBAC1Q9BSL1 405 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 KAT14Q9H8E8 782 aa15.45■□□□□ 0.06
ERCC3-209ENST00000494464 KBTBD13C9JR72 458 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 POTEB2H3BUK9 544 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 TAL1P17542 331 aaPredicted RBP15.44■□□□□ 0.06
ERCC3-209ENST00000494464 ASPRV1Q53RT3 343 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 BMP2KLQ5H9B9 411 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 MUM1L1Q5H9M0 696 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
ERCC3-209ENST00000494464 C7orf61Q8IZ16 206 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 MAP4K1Q92918 833 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 PRO3102Q9H379 93 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 ABHD16BQ9H3Z7 469 aa15.44■□□□□ 0.06
ERCC3-209ENST00000494464 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.44■□□□□ 0.06
ERCC3-209ENST00000494464 COLQQ9Y215 455 aaPredicted RBP15.44■□□□□ 0.06
ERCC3-209ENST00000494464 SLC34A2O95436 690 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 TRDNQ13061 729 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 LRRC41Q15345 812 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 SEC23AQ15436 765 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 LRRC26Q2I0M4 334 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 GJC2Q5T442 439 aaPredicted RBP15.43■□□□□ 0.06
ERCC3-209ENST00000494464 ARMCX2Q7L311 632 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 SENP6Q9GZR1 1112 aaPredicted RBP15.43■□□□□ 0.06
ERCC3-209ENST00000494464 XPNPEP3Q9NQH7 507 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 CYP39A1Q9NYL5 469 aa15.43■□□□□ 0.06
ERCC3-209ENST00000494464 CNTN2Q02246 1040 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 IFIT1BQ5T764 474 aaKnown RBP15.42■□□□□ 0.06
ERCC3-209ENST00000494464 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 CYB5R4Q7L1T6 521 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 ZHX1Q9UKY1 873 aaPredicted RBP15.42■□□□□ 0.06
ERCC3-209ENST00000494464 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 DNAH12Q6ZR08 3092 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 MYH6P13533 1939 aa15.42■□□□□ 0.06
ERCC3-209ENST00000494464 SOWAHBA6NEL2 793 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 ASB14A6NK59 587 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 E7EWF7 191 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 ADAMTS4O75173 837 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms