RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 RBL2Q08999 1139 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 CDKAL1Q5VV42 579 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 APTXQ7Z2E3 356 aaKnown RBP18.66■□□□□ 0.58
SYP-208ENST00000494396 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 TMTC2Q8N394 836 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 ESR2Q92731 530 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 PHKBQ93100 1093 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
SYP-208ENST00000494396 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 ARPP21Q9UBL0 812 aaPredicted RBP18.66■□□□□ 0.58
SYP-208ENST00000494396 CHRNA5P30532 468 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
SYP-208ENST00000494396 MTF1Q14872 753 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 CYP26C1Q6V0L0 522 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 PACS2Q86VP3 889 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 RUBCNQ92622 972 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 NCAPGQ9BPX3 1015 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 IRX2Q9BZI1 471 aaPredicted RBP18.65■□□□□ 0.58
SYP-208ENST00000494396 MYO6Q9UM54 1294 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 SMIM22K7EJ46 135 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 RANBP6O60518 1105 aaKnown RBP18.65■□□□□ 0.58
SYP-208ENST00000494396 SHOX2O60902 331 aaPredicted RBP18.65■□□□□ 0.58
SYP-208ENST00000494396 GTF2IP78347 998 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 AMPD2Q01433 879 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 SPAG1Q07617 926 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 SLC35F6Q8N357 371 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 AIFM3Q96NN9 605 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 UBAC1Q9BSL1 405 aa18.65■□□□□ 0.58
SYP-208ENST00000494396 FBXO2Q9UK22 296 aaPredicted RBP18.65■□□□□ 0.58
SYP-208ENST00000494396 N4BP1O75113 896 aaKnown RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 RNF40O75150 1001 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 FGRP09769 529 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 MMS22LQ6ZRQ5 1243 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 TADA2BQ86TJ2 420 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 CEP89Q96ST8 783 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 SAMSN1Q9NSI8 373 aaKnown RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 G3V3G9 751 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 USP8P40818 1118 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 RCAN1P53805 252 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 DCAF8Q5TAQ9 597 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 SH3RF3Q8TEJ3 882 aaPredicted RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 SLC16A10Q8TF71 515 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 GSDMAQ96QA5 445 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 MYCBPQ99417 103 aaPredicted RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 RTFDC1Q9BY42 306 aaPredicted RBP18.64■□□□□ 0.57
SYP-208ENST00000494396 SUGT1Q9Y2Z0 365 aa18.64■□□□□ 0.57
SYP-208ENST00000494396 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 LRRC10BA6NIK2 292 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 POLR2DO15514 142 aaKnown RBP18.63■□□□□ 0.57
SYP-208ENST00000494396 ACTN4O43707 911 aaKnown RBP18.63■□□□□ 0.57
SYP-208ENST00000494396 PRPF6O94906 941 aaKnown RBP18.63■□□□□ 0.57
SYP-208ENST00000494396 RHOXF2BP0C7M4 288 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 IFNAR1P17181 557 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 CKAP4Q07065 602 aaKnown RBP18.63■□□□□ 0.57
SYP-208ENST00000494396 SEC23AQ15436 765 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 ZNF662Q6ZS27 426 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 EHBP1Q8NDI1 1231 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 FAM163AQ96GL9 167 aaPredicted RBP18.63■□□□□ 0.57
SYP-208ENST00000494396 RHOXF2Q9BQY4 288 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 MCM9Q9NXL9 1143 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 TNKSO95271 1327 aa18.63■□□□□ 0.57
SYP-208ENST00000494396 FMNL1O95466 1100 aaPredicted RBP18.62■□□□□ 0.57
SYP-208ENST00000494396 PLCG2P16885 1265 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 USP14P54578 494 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
SYP-208ENST00000494396 RTN1Q16799 776 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 GBP6Q6ZN66 633 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 GPR75-ASB3A0A0A6YYF3 556 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
SYP-208ENST00000494396 PSMD14O00487 310 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 MMP1P03956 469 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 BTDP43251 543 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 ZNF654Q8IZM8 581 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 COG1Q8WTW3 980 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 MED15Q96RN5 788 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
SYP-208ENST00000494396 BMP15O95972 392 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 CUL4BQ13620 913 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 AMOTL1Q8IY63 956 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 ZSCAN10Q96SZ4 725 aaPredicted RBP18.61■□□□□ 0.57
SYP-208ENST00000494396 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 FOXN1O15353 648 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 ORC4O43929 436 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 SYF2O95926 243 aaKnown RBP18.61■□□□□ 0.57
SYP-208ENST00000494396 CC2D2BQ6DHV5 1058 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 IQCEQ6IPM2 695 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 TRAPPC11Q7Z392 1133 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 CCDC91Q7Z6B0 441 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 RPAINQ86UA6 219 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 TRMT44Q8IYL2 757 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms