RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 MAP3K11Q16584 847 aa4.04□□□□□ -1.76
PTPN12-212ENST00000494248 TSNAXIP1Q2TAA8 658 aa4.04□□□□□ -1.76
PTPN12-212ENST00000494248 LIMS2Q7Z4I7 341 aa4.04□□□□□ -1.76
PTPN12-212ENST00000494248 VPS11Q9H270 941 aa4.04□□□□□ -1.76
PTPN12-212ENST00000494248 FAM8A1Q9UBU6 413 aa4.04□□□□□ -1.76
PTPN12-212ENST00000494248 TTF2Q9UNY4 1162 aaKnown RBP4.04□□□□□ -1.76
PTPN12-212ENST00000494248 HS3ST3A1Q9Y663 406 aa4.04□□□□□ -1.76
PTPN12-212ENST00000494248 LTBP3Q9NS15 1303 aa4.03□□□□□ -1.76
PTPN12-212ENST00000494248 PRAMEF1O95521 474 aa4.03□□□□□ -1.76
PTPN12-212ENST00000494248 LIG3P49916 1009 aa4.03□□□□□ -1.76
PTPN12-212ENST00000494248 JARID2Q92833 1246 aaPredicted RBP4.03□□□□□ -1.76
PTPN12-212ENST00000494248 CCDC74BQ96LY2 380 aa4.03□□□□□ -1.76
PTPN12-212ENST00000494248 KIF2CQ99661 725 aa4.03□□□□□ -1.76
PTPN12-212ENST00000494248 MIR1-1HGQ9H1L0 117 aa4.03□□□□□ -1.76
PTPN12-212ENST00000494248 A0A1W2PQ45 241 aaPredicted RBP4.02□□□□□ -1.77
PTPN12-212ENST00000494248 A0A1W2PQY0 241 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 SSU72P8A0A1W2PR75 194 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 ASGR2P07307 311 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 DBHP09172 617 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 FMR1Q06787 632 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPN12-212ENST00000494248 ICAM4Q14773 271 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 NR1I3Q14994 352 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 NBPF9Q3BBW0 867 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 CHST13Q8NET6 341 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 ASCC2Q9H1I8 757 aaPredicted RBP4.02□□□□□ -1.77
PTPN12-212ENST00000494248 TLR6Q9Y2C9 796 aa4.02□□□□□ -1.77
PTPN12-212ENST00000494248 UBOX5O94941 541 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 CTSKP43235 329 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 SARSP49591 514 aaKnown RBP4.01□□□□□ -1.77
PTPN12-212ENST00000494248 PRR5P85299 388 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 CCDC85BQ15834 202 aaPredicted RBP4.01□□□□□ -1.77
PTPN12-212ENST00000494248 BCAS3Q9H6U6 928 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 CD248Q9HCU0 757 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 REV1Q9UBZ9 1251 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 KLHL3Q9UH77 587 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 INVSQ9Y283 1065 aa4.01□□□□□ -1.77
PTPN12-212ENST00000494248 PRR36Q9H6K5 1346 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 MAPK8P45983 427 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 ALG1LQ6GMV1 187 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 BNC2Q6ZN30 1099 aaPredicted RBP4□□□□□ -1.77
PTPN12-212ENST00000494248 B3GNT8Q7Z7M8 397 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 PHACTR4Q8IZ21 702 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 ADAMTS17Q8TE56 1095 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 KISS1RQ969F8 398 aaPredicted RBP4□□□□□ -1.77
PTPN12-212ENST00000494248 C11orf21Q9P2W6 132 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 GNEQ9Y223 722 aaKnown RBP4□□□□□ -1.77
PTPN12-212ENST00000494248 PCSK5Q92824 1860 aa4□□□□□ -1.77
PTPN12-212ENST00000494248 FAM221AA4D161 298 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 SRGAP3O43295 1099 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 CYBBP04839 570 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 LMNB1P20700 586 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-212ENST00000494248 PDE4CQ08493 712 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 NBPF12Q5TAG4 269 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-212ENST00000494248 PAQR3Q6TCH7 311 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 USP51Q70EK9 711 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 CDADC1Q9BWV3 514 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 RNF38Q9H0F5 515 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 AP5S1Q9NUS5 200 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 SPG7Q9UQ90 795 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 FAN1Q9Y2M0 1017 aa3.99□□□□□ -1.77
PTPN12-212ENST00000494248 POLR3KQ9Y2Y1 108 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-212ENST00000494248 MEIS1O00470 390 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 RGS13O14921 159 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 SIGLEC6O43699 453 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 ZNF205O95201 554 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 NCAM1P13591 858 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 LMO1P25800 156 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 MAPK1P28482 360 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 RTP2Q5QGT7 225 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 BHLHA9Q7RTU4 235 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 EAF1Q96JC9 268 aaPredicted RBP3.98□□□□□ -1.77
PTPN12-212ENST00000494248 SYT3Q9BQG1 590 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 KLC2Q9H0B6 622 aa3.98□□□□□ -1.77
PTPN12-212ENST00000494248 F8W031 263 aaPredicted RBP3.97□□□□□ -1.77
PTPN12-212ENST00000494248 HTR3BO95264 441 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 ONECUT2O95948 504 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 PMLP29590 882 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 GBP1P32455 592 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 R3HDM1Q15032 1099 aaKnown RBP3.97□□□□□ -1.77
PTPN12-212ENST00000494248 RGL3Q3MIN7 710 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 PALM2Q8IXS6 379 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 RXFP1Q9HBX9 757 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 NTMQ9P121 344 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 PPP4R1LQ9P1A2 415 aa3.97□□□□□ -1.77
PTPN12-212ENST00000494248 VAV1P15498 845 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 ATP2B2Q01814 1243 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 SMAD4Q13485 552 aaKnown RBP3.96□□□□□ -1.78
PTPN12-212ENST00000494248 IGFL4Q6B9Z1 124 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 SMARCC2Q8TAQ2 1214 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 FRMD6Q96NE9 622 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 CHST7Q9NS84 486 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 BIN2Q9UBW5 565 aaPredicted RBP3.96□□□□□ -1.78
PTPN12-212ENST00000494248 GTF3C3Q9Y5Q9 886 aa3.96□□□□□ -1.78
PTPN12-212ENST00000494248 ZNF536O15090 1300 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 GPR42O15529 346 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 F13A1P00488 732 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 ACRP10323 421 aa3.95□□□□□ -1.78
PTPN12-212ENST00000494248 TACR1P25103 407 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms