RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 USP5P45974 858 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 CHMP4BP1P59074 171 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 PTGDRQ13258 359 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 SLF2Q8IX21 1173 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 NSUN4Q96CB9 384 aaKnown RBP12.93□□□□□ -0.34
RFC4-214ENST00000494047 DHTKD1Q96HY7 919 aaPredicted RBP12.93□□□□□ -0.34
RFC4-214ENST00000494047 CRAMP1Q96RY5 1269 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 NAPGQ99747 312 aaPredicted RBP12.93□□□□□ -0.34
RFC4-214ENST00000494047 TSGA10Q9BZW7 698 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 CCSER1Q9C0I3 900 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 PSD3Q9NYI0 1048 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 FHOD1Q9Y613 1164 aa12.93□□□□□ -0.34
RFC4-214ENST00000494047 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
RFC4-214ENST00000494047 NAV1Q8NEY1 1877 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 SLC26A4O43511 780 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 GNA11P29992 359 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 HIBADHP31937 336 aaKnown RBP12.92□□□□□ -0.34
RFC4-214ENST00000494047 STAT6P42226 847 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
RFC4-214ENST00000494047 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 APTXQ7Z2E3 356 aaKnown RBP12.92□□□□□ -0.34
RFC4-214ENST00000494047 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 MSANTD4Q8NCY6 345 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 SDR42E1Q8WUS8 393 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 C7orf43Q8WVR3 580 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 ZKSCAN3Q9BRR0 538 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
RFC4-214ENST00000494047 TAOK3Q9H2K8 898 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 DISC1Q9NRI5 854 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 SAMSN1Q9NSI8 373 aaKnown RBP12.92□□□□□ -0.34
RFC4-214ENST00000494047 CWC15Q9P013 229 aaKnown RBP12.92□□□□□ -0.34
RFC4-214ENST00000494047 MINPP1Q9UNW1 487 aa12.92□□□□□ -0.34
RFC4-214ENST00000494047 DICER1Q9UPY3 1922 aaKnown RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 NFKBIEO00221 500 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 RPN1P04843 607 aaKnown RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 CYLC1P35663 651 aaPredicted RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 DNM2P50570 870 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 COPB1P53618 953 aaKnown RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 TCP11X2Q5H9J9 407 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 FIGNQ5HY92 759 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 CCDC70Q6NSX1 233 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 CC2D1AQ6P1N0 951 aaPredicted RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 FAM84BQ96KN1 310 aaPredicted RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 DCP1AQ9NPI6 582 aaPredicted RBP12.91□□□□□ -0.34
RFC4-214ENST00000494047 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 ABHD10Q9NUJ1 306 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
RFC4-214ENST00000494047 COL1A1P02452 1464 aaPredicted RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 MYH1P12882 1939 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 CTAGE15A4D2H0 777 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 USP17L21D6R901 530 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 FOXN1O15353 648 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 RHOBTB3O94955 611 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 CTAGE8P0CG41 777 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 AFMP43652 599 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 CDK17Q00537 523 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 RBL2Q08999 1139 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 GRM4Q14833 912 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 HDXQ7Z353 690 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 CTAGE6Q86UF2 777 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 CTAGE4Q8IX94 777 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
RFC4-214ENST00000494047 SPZ1Q9BXG8 430 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
RFC4-214ENST00000494047 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 LGALS16A8MUM7 142 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 KRT86O43790 486 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 BBOX1O75936 387 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 UBA7P41226 1012 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
RFC4-214ENST00000494047 RASSF7Q02833 373 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 KRT31Q15323 416 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 NPY5RQ15761 445 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms