RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 SAGE1Q9NXZ1 904 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 PTPDC1A2A3K4 754 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 IGF2BP3O00425 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
ACTB-213ENST00000493945 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
ACTB-213ENST00000493945 LARGE1O95461 756 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 SLC25A27O95847 323 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 PDCP20941 246 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 PLS1Q14651 629 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 FAM110CQ1W6H9 321 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 CCDC82Q8N4S0 544 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 SRBD1Q8N5C6 995 aaKnown RBP17.23■□□□□ 0.35
ACTB-213ENST00000493945 PAGR1Q9BTK6 254 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
ACTB-213ENST00000493945 FBXO40Q9UH90 709 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
ACTB-213ENST00000493945 COL11A1P12107 1806 aaPredicted RBP17.23■□□□□ 0.35
ACTB-213ENST00000493945 RLFQ13129 1914 aa17.23■□□□□ 0.35
ACTB-213ENST00000493945 ABCB11O95342 1321 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 ICAM1P05362 532 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 HTRA3P83110 453 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 CUL4AQ13619 759 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
ACTB-213ENST00000493945 PTPN18Q99952 460 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 MAF1Q9H063 256 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
ACTB-213ENST00000493945 ADAMTS5Q9UNA0 930 aa17.22■□□□□ 0.35
ACTB-213ENST00000493945 MRPL11Q9Y3B7 192 aaKnown RBP17.22■□□□□ 0.35
ACTB-213ENST00000493945 TLR2O60603 784 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 CYP2C8P10632 490 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 SCG2P13521 617 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 KIF22Q14807 665 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 ARHGEF6Q15052 776 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 PFKFB3Q16875 520 aaPredicted RBP17.21■□□□□ 0.35
ACTB-213ENST00000493945 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 SNRNP48Q6IEG0 339 aaKnown RBP17.21■□□□□ 0.35
ACTB-213ENST00000493945 CCDC174Q6PII3 467 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
ACTB-213ENST00000493945 MTMR8Q96EF0 704 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 PIGSQ96S52 555 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
ACTB-213ENST00000493945 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
ACTB-213ENST00000493945 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
ACTB-213ENST00000493945 STAT3P40763 770 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 ERVK-9P63128 1117 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 ERVK-24P63145 666 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 NTRK3Q16288 839 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
ACTB-213ENST00000493945 SHCBP1Q8NEM2 672 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 CUL5Q93034 780 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 PHKBQ93100 1093 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 MROH8Q9H579 483 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 MORF4L1Q9UBU8 362 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 PCDHA1Q9Y5I3 950 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
ACTB-213ENST00000493945 CYTH3O43739 400 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 CALML3P27482 149 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 GNA11P29992 359 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 NAPAP54920 295 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 CRHR2Q13324 411 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACTB-213ENST00000493945 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 SAMD3Q8N6K7 520 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 CHST13Q8NET6 341 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 CPVLQ9H3G5 476 aa17.19■□□□□ 0.34
ACTB-213ENST00000493945 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
ACTB-213ENST00000493945 MAPK4P31152 587 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 FUT2Q10981 343 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 USH1GQ495M9 461 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 MCTP2Q6DN12 878 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 RGS22Q8NE09 1264 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 ACAD9Q9H845 621 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
ACTB-213ENST00000493945 BARHL2Q9NY43 387 aa17.18■□□□□ 0.34
ACTB-213ENST00000493945 ZNF214Q9UL59 606 aaPredicted RBP17.18■□□□□ 0.34
ACTB-213ENST00000493945 ALAS1P13196 640 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 GJB2P29033 226 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms