RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 NOSTRINQ8IVI9 506 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 PCDHA4Q9UN74 947 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
VPS52-220ENST00000493674 A0A0G2JLL6 359 aaPredicted RBP14.55□□□□□ -0.08
VPS52-220ENST00000493674 TRIM75PA6NK02 468 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 HMGCS2P54868 508 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 KRT85P78386 507 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 NR5A1Q13285 461 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 PRRT2Q7Z6L0 340 aaPredicted RBP14.55□□□□□ -0.08
VPS52-220ENST00000493674 BLIDQ8IZY5 108 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 FBXO28Q9NVF7 368 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 ELP1O95163 1332 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 PLXNA1Q9UIW2 1896 aa14.55□□□□□ -0.08
VPS52-220ENST00000493674 CXCL11O14625 94 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 NAPAP54920 295 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 NLRP5P59047 1200 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 TTLL12Q14166 644 aaPredicted RBP14.54□□□□□ -0.08
VPS52-220ENST00000493674 TEX2Q8IWB9 1127 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 USP28Q96RU2 1077 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 RPAP3Q9H6T3 665 aaPredicted RBP14.54□□□□□ -0.08
VPS52-220ENST00000493674 GBA2Q9HCG7 927 aaPredicted RBP14.54□□□□□ -0.08
VPS52-220ENST00000493674 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 LMBRD1Q9NUN5 540 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 PPP1R9AQ9ULJ8 1098 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 ADAMTS5Q9UNA0 930 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 MYPNQ86TC9 1320 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 LRRC37A2A6NM11 1700 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 PLXNB2O15031 1838 aa14.54□□□□□ -0.08
VPS52-220ENST00000493674 ZNF536O15090 1300 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 IRF6O14896 467 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 FDX1P10109 184 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 GJA5P36382 358 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 NASPP49321 788 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 TOB1P50616 345 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 MOGSQ13724 837 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 EARS2Q5JPH6 523 aaKnown RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 PRPF38AQ8NAV1 312 aaKnown RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 PROCA1Q8NCQ7 364 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 COA7Q96BR5 231 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 ZNF396Q96N95 335 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 AMNQ9BXJ7 453 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 RIC8AQ9NPQ8 531 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 RTEL1Q9NZ71 1219 aa14.53□□□□□ -0.08
VPS52-220ENST00000493674 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 MORC2Q9Y6X9 1032 aaPredicted RBP14.53□□□□□ -0.08
VPS52-220ENST00000493674 FAM205CA6NFA0 338 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 SMCO2A6NFE2 343 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 GOLGA6L22H0YM25 854 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 OPLAHO14841 1288 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 CELF2O95319 508 aaKnown RBP14.52□□□□□ -0.09
VPS52-220ENST00000493674 PTMSP20962 102 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 GNA11P29992 359 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 CLK2P49760 499 aaKnown RBP14.52□□□□□ -0.09
VPS52-220ENST00000493674 TRAF1Q13077 416 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 IKQ13123 557 aaPredicted RBP14.52□□□□□ -0.09
VPS52-220ENST00000493674 NOM1Q5C9Z4 860 aaKnown RBP14.52□□□□□ -0.09
VPS52-220ENST00000493674 CST9Q5W186 159 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 CATSPERGQ6ZRH7 1159 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 FBXO11Q86XK2 927 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 LEO1Q8WVC0 666 aaPredicted RBP14.52□□□□□ -0.09
VPS52-220ENST00000493674 OPTNQ96CV9 577 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 OTUD5Q96G74 571 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 HHIPL1Q96JK4 782 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 TANGO6Q9C0B7 1094 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 SCAND2PQ9GZW5 306 aaPredicted RBP14.52□□□□□ -0.09
VPS52-220ENST00000493674 SLC38A10Q9HBR0 1119 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 TMOD4Q9NZQ9 345 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 RCOR1Q9UKL0 485 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 CFAP45Q9UL16 551 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 PCDHA6Q9UN73 950 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 PCDHA8Q9Y5H6 950 aa14.52□□□□□ -0.09
VPS52-220ENST00000493674 PCNTO95613 3336 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 RASSF10A6NK89 507 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 YEATS4O95619 227 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
VPS52-220ENST00000493674 TRAPPC10P48553 1259 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 ADCY7P51828 1080 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 SNAP25P60880 206 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 RILPL1Q5EBL4 403 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 BICD2Q8TD16 824 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 KIFC2Q96AC6 838 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 FTOQ9C0B1 505 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS52-220ENST00000493674 GLT8D2Q9H1C3 349 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 PCDHA1Q9Y5I3 950 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 TLL2Q9Y6L7 1015 aa14.51□□□□□ -0.09
VPS52-220ENST00000493674 MGAMO43451 1857 aa14.5□□□□□ -0.09
VPS52-220ENST00000493674 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
VPS52-220ENST00000493674 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
VPS52-220ENST00000493674 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
VPS52-220ENST00000493674 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
VPS52-220ENST00000493674 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms