RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
RHBDF1-211ENST00000493647 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.16
RHBDF1-211ENST00000493647 PORCNQ9H237 461 aa14.08□□□□□ -0.16
RHBDF1-211ENST00000493647 RBM28Q9NW13 759 aaKnown RBP14.08□□□□□ -0.16
RHBDF1-211ENST00000493647 CNTNAP5Q8WYK1 1306 aa14.08□□□□□ -0.16
RHBDF1-211ENST00000493647 hCG_1642624A0A1W2PR95 340 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 ATP2A1O14983 1001 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 PPFIA3O75145 1194 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 PLS1Q14651 629 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 CDC37Q16543 378 aaPredicted RBP14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 PIBF1Q8WXW3 757 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 LZTS2Q9BRK4 669 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 ARHGAP39Q9C0H5 1083 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 LIMCH1Q9UPQ0 1083 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 RIPK3Q9Y572 518 aa14.07□□□□□ -0.16
RHBDF1-211ENST00000493647 ST18O60284 1047 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 ECM2O94769 699 aaPredicted RBP14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 ICAM1P05362 532 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 FDX1P10109 184 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 SMARCA1P28370 1054 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 STAT3P40763 770 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 SP3Q02447 781 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 HOMER1Q86YM7 354 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 EFCC1Q9HA90 598 aa14.06□□□□□ -0.16
RHBDF1-211ENST00000493647 CCDC196A0A1B0GTZ2 297 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 ZBTB5O15062 677 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 FKTNO75072 461 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 CTDNEP1O95476 244 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 ERCC3P19447 782 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 OAZ1P54368 228 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 LACTBP83111 547 aaPredicted RBP14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 PPP2R5BQ15173 497 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 CD99L2Q8TCZ2 262 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 PHKBQ93100 1093 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 TEX13BQ9BXU2 312 aa14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 CTDP1Q9Y5B0 961 aaPredicted RBP14.05□□□□□ -0.16
RHBDF1-211ENST00000493647 PNMA6FA0A0J9YX94 578 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 IFNAR1P17181 557 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 SLC4A3P48751 1232 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 CTCFP49711 727 aaPredicted RBP14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 LBX1P52954 281 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 MUM1L1Q5H9M0 696 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 SHCBP1Q8NEM2 672 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 RRP36Q96EU6 259 aaKnown RBP14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 TMX3Q96JJ7 454 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 TRIM47Q96LD4 638 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 ZSCAN31Q96LW9 406 aaPredicted RBP14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 CCPG1Q9ULG6 757 aa14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
RHBDF1-211ENST00000493647 ALAS1P13196 640 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 CCNA1P78396 465 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 PKN1Q16512 942 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 USH1GQ495M9 461 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 NCAPG2Q86XI2 1143 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 FBXO11Q86XK2 927 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 CCDC83Q8IWF9 413 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 IL27Q8NEV9 243 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 HOMER2Q9NSB8 354 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 RNF146Q9NTX7 359 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 ZSWIM8A7E2V4 1837 aa14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 COL11A1P12107 1806 aaPredicted RBP14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 BAZ2BQ9UIF8 2168 aaKnown RBP14.03□□□□□ -0.16
RHBDF1-211ENST00000493647 CPLX1O14810 134 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 PRPF3O43395 683 aaKnown RBP14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 JAK2O60674 1132 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 SLC25A27O95847 323 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 MAPK4P31152 587 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 PSMC4P43686 418 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 GPR142Q7Z601 462 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 NSUN7Q8NE18 718 aaKnown RBP14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 GPKOWQ92917 476 aaPredicted RBP eCLIP14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 COA7Q96BR5 231 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 SHISA4Q96DD7 197 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 AMNQ9BXJ7 453 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 SLC26A6Q9BXS9 759 aa14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 SH2B1Q9NRF2 756 aaPredicted RBP14.02□□□□□ -0.17
RHBDF1-211ENST00000493647 NFIBO00712 420 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 OPLAHO14841 1288 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 MCM2P49736 904 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 FCGRTP55899 365 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 WDR78Q5VTH9 848 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 WWC2Q6AWC2 1192 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 TYW1BQ6NUM6 668 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 PLEKHH3Q7Z736 793 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 CHST13Q8NET6 341 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 SNX21Q969T3 373 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms