RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 CUL9Q8IWT3 2517 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 MOXD2PA6NHM9 499 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 DCDC2CA8MYV0 355 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 KIAA0355O15063 1070 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 ADCY6O43306 1168 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 C6orf222P0C671 652 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 FDX1P10109 184 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 KCNA10Q16322 511 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 ANKRD33Q7Z3H0 272 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 KLHDC9Q8NEP7 349 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 FGD4Q96M96 766 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 TMEM39AQ9NV64 488 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 STX8Q9UNK0 236 aa12.19□□□□□ -0.46
NUDCD3-210ENST00000493613 VCANP13611 3396 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 MYADML2A6NDP7 307 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CST5P28325 142 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 SLC1A4P43007 532 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 SMAD3P84022 425 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CNTN2Q02246 1040 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 FPGSQ05932 587 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CTDSPL2Q05D32 466 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CCSAPQ6IQ19 270 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CCDC129Q6ZRS4 1044 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 GLT1D1Q96MS3 346 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 TOX2Q96NM4 488 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-210ENST00000493613 ZNF536O15090 1300 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 MROH7Q68CQ1 1323 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 SALL3Q9BXA9 1300 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 FOXP2O15409 715 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 NMT2O60551 498 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 ASGR1P07306 291 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 MCCP23508 829 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 EPHB4P54760 987 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 RRP1P56182 461 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 ANKRD45Q5TZF3 282 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 RNPC3Q96LT9 517 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 UPF3AQ9H1J1 476 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 IL17RBQ9NRM6 502 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 RNF146Q9NTX7 359 aa12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUDCD3-210ENST00000493613 CHD9Q3L8U1 2897 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 ELP1O95163 1332 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 KIAA1217Q5T5P2 1943 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 ALAS1P13196 640 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 GJA9P57773 515 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 RCSD1Q6JBY9 416 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 VTI1AQ96AJ9 217 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 CDX2Q99626 313 aaPredicted RBP12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 KATNBL1Q9H079 304 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 SEMA6BQ9H3T3 888 aa12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 A1CFQ9NQ94 594 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-210ENST00000493613 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 RANBP6O60518 1105 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 PLA2G6O60733 806 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 TIMP1P01033 207 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 SNAP25P60880 206 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 TKFCQ3LXA3 575 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 CCDC174Q6PII3 467 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 TTYH1Q9H313 450 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 TBX21Q9UL17 535 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 PRR12Q9ULL5 1215 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 MTMR7Q9Y216 660 aa12.15□□□□□ -0.46
NUDCD3-210ENST00000493613 REV3LO60673 3130 aa12.15□□□□□ -0.47
NUDCD3-210ENST00000493613 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 A0A0U1RQG5 324 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 ASB14A6NK59 587 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 ARVCFO00192 962 aa12.14□□□□□ -0.47
NUDCD3-210ENST00000493613 CDK7P50613 346 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms