RNA–Protein interactions for RNA: ENST00000493427.1

ABCD4-215, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 736 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-215ENST00000493427 NSUN3Q9H649 340 aaKnown RBP15.21■□□□□ 0.03
ABCD4-215ENST00000493427 SPC25Q9HBM1 224 aa15.21■□□□□ 0.03
ABCD4-215ENST00000493427 ATG2AQ2TAZ0 1938 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 CYP2C9P11712 490 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 FCER1AP12319 257 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 RHBDL3P58872 404 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 ITGA7Q13683 1181 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 TRMT2AQ8IZ69 625 aaKnown RBP15.2■□□□□ 0.02
ABCD4-215ENST00000493427 VGLL2Q8N8G2 317 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 CRBNQ96SW2 442 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
ABCD4-215ENST00000493427 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
ABCD4-215ENST00000493427 PCDHGC5Q9Y5F6 944 aa15.2■□□□□ 0.02
ABCD4-215ENST00000493427 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 A0A1B0GUL7 405 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 DEFB103AP81534 67 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 BEX3Q00994 111 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 LRRC24Q50LG9 513 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
ABCD4-215ENST00000493427 MROH8Q9H579 483 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 DNAJC18Q9H819 358 aa15.19■□□□□ 0.02
ABCD4-215ENST00000493427 TBX10O75333 385 aa15.18■□□□□ 0.02
ABCD4-215ENST00000493427 ATXN1P54253 815 aaKnown RBP15.18■□□□□ 0.02
ABCD4-215ENST00000493427 GJA9P57773 515 aa15.18■□□□□ 0.02
ABCD4-215ENST00000493427 WDR5P61964 334 aaKnown RBP15.18■□□□□ 0.02
ABCD4-215ENST00000493427 FKBP5Q13451 457 aaPredicted RBP15.18■□□□□ 0.02
ABCD4-215ENST00000493427 CBX2Q14781 532 aaPredicted RBP15.18■□□□□ 0.02
ABCD4-215ENST00000493427 MMP19Q99542 508 aa15.18■□□□□ 0.02
ABCD4-215ENST00000493427 CD207Q9UJ71 328 aa15.18■□□□□ 0.02
ABCD4-215ENST00000493427 CTAGE5O15320 804 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
ABCD4-215ENST00000493427 BAIAP3O94812 1187 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 PDE8BO95263 885 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 IFIT1P09914 478 aaKnown RBP15.17■□□□□ 0.02
ABCD4-215ENST00000493427 CTC1Q2NKJ3 1217 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 ZNF792Q3KQV3 632 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 DCLK2Q8N568 766 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 MROH7-TTC4A0A0A0MT08 1334 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
ABCD4-215ENST00000493427 RFC2P35250 354 aa15.16■□□□□ 0.02
ABCD4-215ENST00000493427 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
ABCD4-215ENST00000493427 FAM117BQ6P1L5 589 aa15.16■□□□□ 0.02
ABCD4-215ENST00000493427 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
ABCD4-215ENST00000493427 RAD9AQ99638 391 aa15.16■□□□□ 0.02
ABCD4-215ENST00000493427 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
ABCD4-215ENST00000493427 MCM3APO60318 1980 aa15.15■□□□□ 0.02
ABCD4-215ENST00000493427 F6X3S4 739 aa15.15■□□□□ 0.02
ABCD4-215ENST00000493427 GJB5O95377 273 aa15.15■□□□□ 0.02
ABCD4-215ENST00000493427 ICAM3P32942 547 aa15.15■□□□□ 0.02
ABCD4-215ENST00000493427 PSMC6P62333 389 aa15.15■□□□□ 0.02
ABCD4-215ENST00000493427 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
ABCD4-215ENST00000493427 SPEGQ15772 3267 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 DCDC2BA2VCK2 349 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 NCK2O43639 380 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 SNAI1O95863 264 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-215ENST00000493427 GH2P01242 217 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 USP14P54578 494 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 PUM3Q15397 648 aaKnown RBP15.14■□□□□ 0.01
ABCD4-215ENST00000493427 CRACR2BQ8N4Y2 399 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-215ENST00000493427 MRPL50Q8N5N7 158 aaKnown RBP15.14■□□□□ 0.01
ABCD4-215ENST00000493427 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 ALDH8A1Q9H2A2 487 aaPredicted RBP15.14■□□□□ 0.01
ABCD4-215ENST00000493427 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 PI4KBQ9UBF8 816 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
ABCD4-215ENST00000493427 RALGAPA2Q2PPJ7 1873 aa15.14■□□□□ 0.01
ABCD4-215ENST00000493427 CYSRT1A8MQ03 144 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 FGFR2P21802 821 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 HYAL1Q12794 435 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 GPM6BQ13491 265 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 ASTLQ6HA08 431 aaPredicted RBP15.13■□□□□ 0.01
ABCD4-215ENST00000493427 ZBTB33Q86T24 672 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 ACER1Q8TDN7 264 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
ABCD4-215ENST00000493427 LINC01565O15544 149 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 CABYRO75952 493 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
ABCD4-215ENST00000493427 ANGPT1Q15389 498 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 RUBCNQ92622 972 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
ABCD4-215ENST00000493427 HAUS7Q99871 368 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 SIL1Q9H173 461 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 R4GN57 208 aa15.12■□□□□ 0.01
ABCD4-215ENST00000493427 FRYQ5TBA9 3013 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 IQCF3P0C7M6 154 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 COG2Q14746 738 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 CCDC144BQ3MJ40 725 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 CRIPAKQ8N1N5 446 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 SEMA4AQ9H3S1 761 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 ZZEF1O43149 2961 aa15.11■□□□□ 0.01
ABCD4-215ENST00000493427 ACVR2BQ13705 512 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms