RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 KIF23Q02241 960 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 COG2Q14746 738 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 SYDE2Q5VT97 1194 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 PRPF38AQ8NAV1 312 aaKnown RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 ATG4CQ96DT6 458 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 LLPHQ9BRT6 129 aaKnown RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-206ENST00000493039 GJB4Q9NTQ9 266 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 PPP1R9AQ9ULJ8 1098 aa10.86□□□□□ -0.67
CSTF1-206ENST00000493039 LOC285556D6RIA3 1793 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 PRPF3O43395 683 aaKnown RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 TAL1P17542 331 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 VEGFBP49765 207 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 GRM1Q13255 1194 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 BECN1Q14457 450 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 HSP90AA2PQ14568 343 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 REPS2Q8NFH8 660 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 CHURC1Q8WUH1 139 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 SLC26A6Q9BXS9 759 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 ISY1Q9ULR0 285 aaKnown RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 ZNF536O15090 1300 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 MANSC4A6NHS7 340 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 PDHXO00330 501 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 VWA5AO00534 786 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 CYP2C8P10632 490 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 TM4SF4P48230 202 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 ANKRD23Q86SG2 305 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 FAM160B2Q86V87 743 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 RANBP17Q9H2T7 1088 aaKnown RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
CSTF1-206ENST00000493039 ORC3Q9UBD5 711 aaPredicted RBP10.85□□□□□ -0.67
CSTF1-206ENST00000493039 QRICH1Q2TAL8 776 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
CSTF1-206ENST00000493039 R3HDMLQ9H3Y0 253 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 TXNRD2Q9NNW7 524 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 ZBTB5O15062 677 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 ADAMTS3O15072 1205 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 HSPA6P17066 643 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 GJB2P29033 226 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 DDIT3P35638 169 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 HERVK_113P62684 666 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 SSRP1Q08945 709 aaKnown RBP10.84□□□□□ -0.67
CSTF1-206ENST00000493039 IKQ13123 557 aaPredicted RBP10.84□□□□□ -0.67
CSTF1-206ENST00000493039 NOGQ13253 232 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
CSTF1-206ENST00000493039 LBX2Q6XYB7 198 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 BTBD7Q9P203 1132 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 RBPJLQ9UBG7 517 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
CSTF1-206ENST00000493039 SLC45A1Q9Y2W3 748 aa10.84□□□□□ -0.67
CSTF1-206ENST00000493039 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
CSTF1-206ENST00000493039 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 CNMDO75829 334 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 CDKL5O76039 1030 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 INHBEP58166 350 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 TMEM132BQ14DG7 1078 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 PFKFB3Q16875 520 aaPredicted RBP10.83□□□□□ -0.68
CSTF1-206ENST00000493039 CPLX2Q6PUV4 134 aaKnown RBP10.83□□□□□ -0.68
CSTF1-206ENST00000493039 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
CSTF1-206ENST00000493039 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 ZNF830Q96NB3 372 aaPredicted RBP10.83□□□□□ -0.68
CSTF1-206ENST00000493039 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.83□□□□□ -0.68
CSTF1-206ENST00000493039 STK36Q9NRP7 1315 aa10.83□□□□□ -0.68
CSTF1-206ENST00000493039 DEXIO95424 95 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 SCG2P13521 617 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 Q3C1V9 767 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 WWC2Q6AWC2 1192 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 OTUD7BQ6GQQ9 843 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 COA7Q96BR5 231 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
CSTF1-206ENST00000493039 SMC3Q9UQE7 1217 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 RIPK3Q9Y572 518 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 MYPNQ86TC9 1320 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 PARP14Q460N5 1801 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 OPLAHO14841 1288 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 IRX3P78415 501 aaPredicted RBP10.82□□□□□ -0.68
CSTF1-206ENST00000493039 HMGN5P82970 282 aaKnown RBP10.82□□□□□ -0.68
CSTF1-206ENST00000493039 NPY5RQ15761 445 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 CCDC174Q6PII3 467 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 TRIM22Q8IYM9 498 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
CSTF1-206ENST00000493039 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
CSTF1-206ENST00000493039 STXBP3O00186 592 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 PKP1Q13835 747 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 CPXCR1Q8N123 301 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 DNAJC5GQ8N7S2 189 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 ADGRA2Q96PE1 1338 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 BARHL2Q9NY43 387 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 VPS54Q9P1Q0 977 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 ATP2A1O14983 1001 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 ICAM1P05362 532 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms