RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PFKFB1P16118 471 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 RHBDL3P58872 404 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 TRIM22Q8IYM9 498 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 ZNF654Q8IZM8 581 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 DEFB129Q9H1M3 183 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 HIBADHP31937 336 aaKnown RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 GCLCP48506 637 aaPredicted RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 NR5A1Q13285 461 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 IQCB1Q15051 598 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 DPCR1Q3MIW9 517 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 AXDND1Q5T1B0 1012 aaPredicted RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 DIS3L2Q8IYB7 885 aaKnown RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 RIOK1Q9BRS2 568 aaKnown RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 GLIS2Q9BZE0 524 aaPredicted RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 RNF41Q9H4P4 317 aaPredicted RBP8.04□□□□□ -1.12
HERC4-211ENST00000492996 ANO10Q9NW15 660 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 CLIP2Q9UDT6 1046 aa8.04□□□□□ -1.12
HERC4-211ENST00000492996 TLR2O60603 784 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
HERC4-211ENST00000492996 MECOMQ03112 1051 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 SLC39A14Q15043 492 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 FAM47AQ5JRC9 791 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 CEP57L1Q8IYX8 460 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 FANCBQ8NB91 859 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 ESR2Q92731 530 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.03□□□□□ -1.12
HERC4-211ENST00000492996 ANKIB1Q9P2G1 1089 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 A0A1W2PQ27 194 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 A0A1W2PQ64 194 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 A0A1W2PQD8 194 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 NMT2O60551 498 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 CYP2D6P10635 497 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 PLCG2P16885 1265 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 IFNAR1P17181 557 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 SAFBQ15424 915 aaKnown RBP eCLIP8.03□□□□□ -1.12
HERC4-211ENST00000492996 FASTKD5Q7L8L6 764 aaKnown RBP8.03□□□□□ -1.12
HERC4-211ENST00000492996 FILIP1Q7Z7B0 1213 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 KIAA1468Q9P260 1216 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
HERC4-211ENST00000492996 C19orf81C9J6K1 198 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 FMNL1O95466 1100 aaPredicted RBP8.02□□□□□ -1.12
HERC4-211ENST00000492996 SYKP43405 635 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 CRKP46108 304 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.12
HERC4-211ENST00000492996 GABPAQ06546 454 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 ARID5BQ14865 1188 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 TSC1Q92574 1164 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 OTUD5Q96G74 571 aa8.02□□□□□ -1.12
HERC4-211ENST00000492996 BCCIPQ9P287 314 aaKnown RBP eCLIP8.02□□□□□ -1.12
HERC4-211ENST00000492996 BAZ2AQ9UIF9 1905 aaKnown RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 AKAP17AQ02040 695 aaKnown RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 CCDC144BQ3MJ40 725 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 MORN1Q5T089 497 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 SHC4Q6S5L8 630 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 SCYL3Q8IZE3 742 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 CRACR2BQ8N4Y2 399 aaPredicted RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 ENAHQ8N8S7 591 aaPredicted RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 NSUN4Q96CB9 384 aaKnown RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 MYH15Q9Y2K3 1946 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 KIAA1671Q9BY89 1806 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 FAM205CA6NFA0 338 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 CMA1P23946 247 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 GRIN1Q05586 938 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 CFAP100Q494V2 611 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 IFIT1BQ5T764 474 aaKnown RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 CTR9Q6PD62 1173 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 OLFM4Q6UX06 510 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 PLA2G4DQ86XP0 818 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 NOSTRINQ8IVI9 506 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 DHX40Q8IX18 779 aaKnown RBP8.02□□□□□ -1.13
HERC4-211ENST00000492996 PDILTQ8N807 584 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 TRERF1Q96PN7 1200 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 OGDHLQ9ULD0 1010 aa8.02□□□□□ -1.13
HERC4-211ENST00000492996 LOXHD1Q8IVV2 1947 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 PLEKHA8P1O95397 391 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 LBX1P52954 281 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 MLLT1Q03111 559 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 PNOCQ13519 176 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 PTPAQ15257 358 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 DZIP1Q86YF9 867 aaKnown RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 KIAA1524Q8TCG1 905 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 ZSCAN10Q96SZ4 725 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 CABP5Q9NP86 173 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 V9GY48 417 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 IGKV6D-41A0A0C4DH26 115 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 CCDC196A0A1B0GTZ2 297 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 MMP1P03956 469 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 MYCNP04198 464 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 CHRM1P11229 460 aaPredicted RBP8.01□□□□□ -1.13
HERC4-211ENST00000492996 U2AF2P26368 475 aaKnown RBP eCLIP8.01□□□□□ -1.133e-11■■■□□ 16.4
HERC4-211ENST00000492996 SNAPC2Q13487 334 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 SBK1Q52WX2 424 aa8.01□□□□□ -1.13
HERC4-211ENST00000492996 IQCA1Q86XH1 822 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms