RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 HMGCS2P54868 508 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 DGKZQ13574 1117 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 SF3A1Q15459 793 aaKnown RBP9.23□□□□□ -0.93
FDPS-218ENST00000492887 QRICH1Q2TAL8 776 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 MOB2Q70IA6 237 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 SIAH1Q8IUQ4 282 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 BLIDQ8IZY5 108 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 LPAR1Q92633 364 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 COA7Q96BR5 231 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 PHF20Q9BVI0 1012 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 RPAP3Q9H6T3 665 aaPredicted RBP9.23□□□□□ -0.93
FDPS-218ENST00000492887 RIOX1Q9H6W3 641 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 JMJD4Q9H9V9 463 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 SH3GLB2Q9NR46 395 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
FDPS-218ENST00000492887 SNCAIPQ9Y6H5 919 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 SMCO2A6NFE2 343 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 BTBD18B2RXH4 712 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 C19orf81C9J6K1 198 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 ZBTB5O15062 677 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 CELF2O95319 508 aaKnown RBP9.22□□□□□ -0.93
FDPS-218ENST00000492887 GNA11P29992 359 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 BACE1P56817 501 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 NR5A1Q13285 461 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 MYSM1Q5VVJ2 828 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 FBXO11Q86XK2 927 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 C2orf69Q8N8R5 385 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 BICD2Q8TD16 824 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 SLF1Q9BQI6 1058 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 WDR18Q9BV38 432 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 AMNQ9BXJ7 453 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 KIAA1683Q9H0B3 1180 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 FOXP1Q9H334 677 aaPredicted RBP9.22□□□□□ -0.93
FDPS-218ENST00000492887 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
FDPS-218ENST00000492887 PRR12Q9ULL5 1215 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 PCDHA4Q9UN74 947 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 WDR81Q562E7 1941 aa9.22□□□□□ -0.93
FDPS-218ENST00000492887 DOCK5Q9H7D0 1870 aa9.21□□□□□ -0.93
FDPS-218ENST00000492887 VCAM1P19320 739 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 FMR1Q06787 632 aaKnown RBP eCLIP9.21□□□□□ -0.94
FDPS-218ENST00000492887 TRAF1Q13077 416 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 SLC35G1Q2M3R5 365 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 KIAA1755Q5JYT7 1200 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.21□□□□□ -0.94
FDPS-218ENST00000492887 PIK3AP1Q6ZUJ8 805 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
FDPS-218ENST00000492887 RGS22Q8NE09 1264 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 OXER1Q8TDS5 423 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 CUL5Q93034 780 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 OPTNQ96CV9 577 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 CLMNQ96JQ2 1002 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 USP28Q96RU2 1077 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 SCAND2PQ9GZW5 306 aaPredicted RBP9.21□□□□□ -0.94
FDPS-218ENST00000492887 GBA2Q9HCG7 927 aaPredicted RBP9.21□□□□□ -0.94
FDPS-218ENST00000492887 FBXO28Q9NVF7 368 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 CEP131Q9UPN4 1083 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 PCDHA1Q9Y5I3 950 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 DDX49Q9Y6V7 483 aaKnown RBP9.21□□□□□ -0.94
FDPS-218ENST00000492887 MCM3APO60318 1980 aa9.21□□□□□ -0.94
FDPS-218ENST00000492887 ZBED4O75132 1171 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 ME1P48163 572 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 PPATQ06203 517 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 MKRN3Q13064 507 aaKnown RBP9.2□□□□□ -0.94
FDPS-218ENST00000492887 RILPL1Q5EBL4 403 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 JAKMIP3Q5VZ66 844 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 ATL3Q6DD88 541 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 GALNT17Q6IS24 598 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 ERO1BQ86YB8 467 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 CPXCR1Q8N123 301 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
FDPS-218ENST00000492887 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
FDPS-218ENST00000492887 SLC10A4Q96EP9 437 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 FTOQ9C0B1 505 aaKnown RBP eCLIP9.2□□□□□ -0.94
FDPS-218ENST00000492887 CCPG1Q9ULG6 757 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 LOXHD1Q8IVV2 1947 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 UTRNP46939 3433 aa9.2□□□□□ -0.94
FDPS-218ENST00000492887 LCTP09848 1927 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 MYH11P35749 1972 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 SPDYE5A6NIY4 337 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 MBD3O95983 291 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 TAL1P17542 331 aaPredicted RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.94
FDPS-218ENST00000492887 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 PPIL2Q13356 520 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 PLS1Q14651 629 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 NONOQ15233 471 aaKnown RBP eCLIP9.19□□□□□ -0.94
FDPS-218ENST00000492887 UBE2SQ16763 222 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 TTC38Q5R3I4 469 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 ANO1Q5XXA6 986 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 CLEC17AQ6ZS10 378 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 KRT25Q7Z3Z0 450 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 FAM177A1Q8N128 213 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms