RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 GNASQ5JWF2 1037 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 SIRT2Q8IXJ6 389 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
SND1-215ENST00000492772 SLC38A10Q9HBR0 1119 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 FEM1BQ9UK73 627 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 GBF1Q92538 1859 aa13.16□□□□□ -0.3
SND1-215ENST00000492772 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 CHGBP05060 677 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 FDX1P10109 184 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 PBX2P40425 430 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 NKX3-2P78367 333 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 FGD4Q96M96 766 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 STRBPQ96SI9 672 aaKnown RBP13.15□□□□□ -0.3
SND1-215ENST00000492772 PPP1R12CQ9BZL4 782 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
SND1-215ENST00000492772 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
SND1-215ENST00000492772 CABYRO75952 493 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 CD4P01730 458 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
SND1-215ENST00000492772 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 MKL1Q969V6 931 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
SND1-215ENST00000492772 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 CTAGE5O15320 804 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 TTLL1O95922 423 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 ACRP10323 421 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 GNAT2P19087 354 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 PPM1EQ8WY54 764 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 ASB2Q96Q27 587 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 KATNBL1Q9H079 304 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 ACAD9Q9H845 621 aa13.13□□□□□ -0.31
SND1-215ENST00000492772 ASB14A6NK59 587 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 BMP3P12645 472 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 COL9A1P20849 921 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 CYP2C18P33260 490 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 TDO2P48775 406 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 MRPS5P82675 430 aaKnown RBP13.12□□□□□ -0.31
SND1-215ENST00000492772 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
SND1-215ENST00000492772 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
SND1-215ENST00000492772 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 SLC43A3Q8NBI5 491 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 APPBP2Q92624 585 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 CEP95Q96GE4 821 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 SLC28A3Q9HAS3 691 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 EPB41L4AQ9HCS5 686 aaPredicted RBP13.12□□□□□ -0.31
SND1-215ENST00000492772 HOMER2Q9NSB8 354 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 ECHDC1Q9NTX5 307 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
SND1-215ENST00000492772 CHD7Q9P2D1 2997 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 ZEB2O60315 1214 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 FGBP02675 491 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
SND1-215ENST00000492772 STAT2P52630 851 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 BEX3Q00994 111 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
SND1-215ENST00000492772 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 CXCL17Q6UXB2 119 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
SND1-215ENST00000492772 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
SND1-215ENST00000492772 NKX2-4Q9H2Z4 354 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
SND1-215ENST00000492772 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
SND1-215ENST00000492772 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 ASTN1O14525 1302 aa13.11□□□□□ -0.31
SND1-215ENST00000492772 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.1□□□□□ -0.31
SND1-215ENST00000492772 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 GPAA1O43292 621 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 PRDM1O75626 825 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 IGFBP4P22692 258 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms