RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 MSRAQ9UJ68 235 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 NOP58Q9Y2X3 529 aaKnown RBP11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 TMX2Q9Y320 296 aa11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF9-203ENST00000492571 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 APBB1O00213 710 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 PGK2P07205 417 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 ITGB8P26012 769 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 EPHB4P54760 987 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 FAAP100Q0VG06 881 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 TMEM132BQ14DG7 1078 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 MFSD5Q6N075 450 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 AACSQ86V21 672 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 TMEM57Q8N5G2 664 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 PCSK9Q8NBP7 692 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 KANSL2Q9H9L4 492 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 TLR7Q9NYK1 1049 aaKnown RBP11.74□□□□□ -0.53
TNFRSF9-203ENST00000492571 SOWAHBA6NEL2 793 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 ELP1O95163 1332 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 IGFBP4P22692 258 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 MRPS5P82675 430 aaKnown RBP11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 KCNA10Q16322 511 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 ZNF792Q3KQV3 632 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 ASB2Q96Q27 587 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 ATP8A2Q9NTI2 1148 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 THEGQ9P2T0 379 aa11.73□□□□□ -0.53
TNFRSF9-203ENST00000492571 ZNF532Q9HCE3 1301 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 VWA5AO00534 786 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 ZNF865P0CJ78 1059 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 PDE6AP16499 860 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 RAB30Q15771 203 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 PSRC1Q6PGN9 363 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 SLC28A3Q9HAS3 691 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 MAST2Q6P0Q8 1798 aa11.72□□□□□ -0.53
TNFRSF9-203ENST00000492571 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 ADAMTS4O75173 837 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 DUSP11O75319 330 aaKnown RBP11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 C6orf222P0C671 652 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 AKR1B1P15121 316 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 TAL1P17542 331 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 USP38Q8NB14 1042 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 PPP1R9AQ9ULJ8 1098 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 ADAMTS5Q9UNA0 930 aa11.71□□□□□ -0.53
TNFRSF9-203ENST00000492571 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
TNFRSF9-203ENST00000492571 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 SYNGAP1Q96PV0 1343 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 SYNRGQ9UMZ2 1314 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 A0A0U1RQG5 324 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 GOLIM4O00461 696 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZBED4O75132 1171 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 CDK8P49336 464 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 AAK1Q2M2I8 961 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 GNASQ5JWF2 1037 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 ADAMTS19Q8TE59 1207 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 FAM122AQ96E09 287 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 DYNLL2Q96FJ2 89 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 UHRF1Q96T88 793 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 PBX4Q9BYU1 374 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 TNNQ9UQP3 1299 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 SPTBN5Q9NRC6 3674 aaKnown RBP11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 CDH23Q9H251 3354 aa11.7□□□□□ -0.54
TNFRSF9-203ENST00000492571 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ARVCFO00192 962 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 FGBP02675 491 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ASGR1P07306 291 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 CYP2D6P10635 497 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 CSF2RAP15509 400 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 TMEM240Q5SV17 173 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 SNRNP48Q6IEG0 339 aaKnown RBP11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 MAMDC4Q6UXC1 1216 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZNF365Q70YC5 407 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ANKRD35Q8N283 1001 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 LCORLQ8N3X6 602 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 PRPF38AQ8NAV1 312 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms