RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 SH3RF1Q7Z6J0 888 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 NEDD1Q8NHV4 660 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 LENG1Q96BZ8 264 aaPredicted RBP17.3■□□□□ 0.36
SS18L1-205ENST00000492466 FGD4Q96M96 766 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 XPNPEP3Q9NQH7 507 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
SS18L1-205ENST00000492466 TRIM43BA6NCK2 446 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 TTLL1O95922 423 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
SS18L1-205ENST00000492466 RARBP10826 455 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 BMP2KLQ5H9B9 411 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 LRRC47Q8N1G4 583 aaKnown RBP17.29■□□□□ 0.36
SS18L1-205ENST00000492466 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
SS18L1-205ENST00000492466 TRIM43Q96BQ3 446 aaPredicted RBP17.29■□□□□ 0.36
SS18L1-205ENST00000492466 LBHD1Q9BQE6 289 aaPredicted RBP17.29■□□□□ 0.36
SS18L1-205ENST00000492466 PDLIM7Q9NR12 457 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 STX8Q9UNK0 236 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
SS18L1-205ENST00000492466 TACC3Q9Y6A5 838 aa17.29■□□□□ 0.36
SS18L1-205ENST00000492466 AKR1A1P14550 325 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 ITGB8P26012 769 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 TLE2Q04725 743 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 AKNAD1Q5T1N1 836 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 CPXCR1Q8N123 301 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 KIFC2Q96AC6 838 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
SS18L1-205ENST00000492466 INCENPQ9NQS7 918 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
SS18L1-205ENST00000492466 SYNGAP1Q96PV0 1343 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 ORC4O43929 436 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 PCP11498 1178 aaKnown RBP17.27■□□□□ 0.36
SS18L1-205ENST00000492466 SHHQ15465 462 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 C9orf50Q5SZB4 431 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 CCSAPQ6IQ19 270 aaPredicted RBP17.27■□□□□ 0.36
SS18L1-205ENST00000492466 ZNF467Q7Z7K2 595 aaPredicted RBP17.27■□□□□ 0.36
SS18L1-205ENST00000492466 TBC1D10CQ8IV04 446 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 SLC17A8Q8NDX2 589 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 STAG1Q8WVM7 1258 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 BADQ92934 168 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 PRKAG2Q9UGJ0 569 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 MTMR7Q9Y216 660 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
SS18L1-205ENST00000492466 A0A1W2PQ45 241 aaPredicted RBP17.26■□□□□ 0.35
SS18L1-205ENST00000492466 A0A1W2PQY0 241 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 SGSM2O43147 1006 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 ADCY6O43306 1168 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 ZBED4O75132 1171 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 CDC45O75419 566 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 OAZ1P54368 228 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
SS18L1-205ENST00000492466 SLFN13Q68D06 897 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 FAM109BQ6ICB4 259 aaPredicted RBP17.26■□□□□ 0.35
SS18L1-205ENST00000492466 RNF180Q86T96 592 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 ESR2Q92731 530 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 IL25Q9H293 177 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 CTDP1Q9Y5B0 961 aaPredicted RBP17.26■□□□□ 0.35
SS18L1-205ENST00000492466 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
SS18L1-205ENST00000492466 CUL9Q8IWT3 2517 aa17.26■□□□□ 0.35
SS18L1-205ENST00000492466 ZNF536O15090 1300 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 NEDD4P46934 1319 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 SYNRGQ9UMZ2 1314 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 SPTBN5Q9NRC6 3674 aaKnown RBP17.25■□□□□ 0.35
SS18L1-205ENST00000492466 BMP3P12645 472 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 NOVP48745 357 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
SS18L1-205ENST00000492466 GMCL1Q96IK5 515 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 KATNBL1Q9H079 304 aa17.25■□□□□ 0.35
SS18L1-205ENST00000492466 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
SS18L1-205ENST00000492466 MCM3APO60318 1980 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 MYADML2A6NDP7 307 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 TRDNQ13061 729 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 ACVR2BQ13705 512 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 CHST13Q8NET6 341 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 GUCD1Q96NT3 240 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
SS18L1-205ENST00000492466 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.24■□□□□ 0.35
SS18L1-205ENST00000492466 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
SS18L1-205ENST00000492466 TMEM232C9JQI7 657 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 KIAA0355O15063 1070 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 NMT2O60551 498 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 PLA2G6O60733 806 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 DUSP11O75319 330 aaKnown RBP17.23■□□□□ 0.35
SS18L1-205ENST00000492466 FGRP09769 529 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 ACLYP53396 1101 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 EPHB4P54760 987 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 ANKRD33Q7Z3H0 272 aa17.23■□□□□ 0.35
SS18L1-205ENST00000492466 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms