RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 KRT9P35527 623 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 HSPA9P38646 679 aaKnown RBP10.76□□□□□ -0.69
VPS8-225ENST00000492449 SFSWAPQ12872 951 aaKnown RBP10.76□□□□□ -0.69
VPS8-225ENST00000492449 MEA1Q16626 185 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 AGBL2Q5U5Z8 902 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 NUP88Q99567 741 aaPredicted RBP10.76□□□□□ -0.69
VPS8-225ENST00000492449 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 KDM3BQ7LBC6 1761 aa10.76□□□□□ -0.69
VPS8-225ENST00000492449 DPPA5A6NC42 116 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 GOLGA6L10A6NI86 522 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 WFS1O76024 890 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 ANKRD20A2Q5SQ80 823 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 PPP1R15BQ5SWA1 713 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 ANKRD20A1Q5TYW2 823 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 ANKRD20A3Q5VUR7 823 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 FAM163AQ96GL9 167 aaPredicted RBP10.75□□□□□ -0.69
VPS8-225ENST00000492449 SWAP70Q9UH65 585 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 BCL9O00512 1426 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 E7EWF7 191 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 MTHFSDQ2M296 383 aaKnown RBP10.75□□□□□ -0.69
VPS8-225ENST00000492449 GNPTABQ3T906 1256 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 CACNA2D4Q7Z3S7 1137 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
VPS8-225ENST00000492449 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
VPS8-225ENST00000492449 TEKT4Q8WW24 435 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 RAPGEF5Q92565 580 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
VPS8-225ENST00000492449 LRRC42Q9Y546 428 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 PIK3C2AO00443 1686 aa10.75□□□□□ -0.69
VPS8-225ENST00000492449 F8W031 263 aaPredicted RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 ASAP2O43150 1006 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 ACTN4O43707 911 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 TCP1P17987 556 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 ALDH1B1P30837 517 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 KIF5BP33176 963 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 SPAG1Q07617 926 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 APBB1IPQ7Z5R6 666 aaPredicted RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 MIPOL1Q8TD10 442 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 NAF1Q96HR8 494 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 PHAXQ9H814 394 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 CTNNAL1Q9UBT7 734 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 PHF24Q9UPV7 400 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 AFF2P51816 1311 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 GOLGA6L10A0A0M3HER8 536 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 NQO1P15559 274 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 SLC7A5Q01650 507 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 ZNF827Q17R98 1081 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 C8orf74Q6P047 294 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 CCDC129Q6ZRS4 1044 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 CCDC197Q8NCU1 140 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 JADE2Q9NQC1 790 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 CWC25Q9NXE8 425 aaPredicted RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 CEP131Q9UPN4 1083 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 E7ENQ6 273 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 H0YGN5 161 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 N4BP3O15049 544 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 CLTAP09496 248 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 CDC25CP30307 473 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 PSMC4P43686 418 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 GNAQP50148 359 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 PPP2R2AP63151 447 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 IDI1Q13907 227 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 KRT31Q15323 416 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 VPS37DQ86XT2 251 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 TRAPPC9Q96Q05 1148 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 NFS1Q9Y697 457 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
VPS8-225ENST00000492449 SLIT1O75093 1534 aa10.74□□□□□ -0.69
VPS8-225ENST00000492449 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 PENKP01210 267 aaPredicted RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 MYL1P05976 194 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 FAM153BP0C7A2 387 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 ATP2A2P16615 1042 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 CYLC1P35663 651 aaPredicted RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 FAM153CQ494X1 144 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 WDR59Q6PJI9 974 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 ANKS4BQ8N8V4 417 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 ZWILCHQ9H900 591 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 POLD4Q9HCU8 107 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 RNF14Q9UBS8 474 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 FAM153AQ9UHL3 310 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 SERTAD1Q9UHV2 236 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 PA2G4Q9UQ80 394 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 C2CD2Q9Y426 696 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.73□□□□□ -0.69
VPS8-225ENST00000492449 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 SPEF2Q9C093 1822 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 A0A1W2PQC6 194 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 PPP1R3GB7ZBB8 358 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 MYZAPP0CAP1 466 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms