RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 IKQ13123 557 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
COPS7B-222ENST00000492423 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
COPS7B-222ENST00000492423 CHURC1Q8WUH1 139 aa17.15■□□□□ 0.34
COPS7B-222ENST00000492423 RPAP3Q9H6T3 665 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-222ENST00000492423 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
COPS7B-222ENST00000492423 ESYT2A0FGR8 921 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 UNCXA6NJT0 531 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 BTBD18B2RXH4 712 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 CELF2O95319 508 aaKnown RBP17.14■□□□□ 0.33
COPS7B-222ENST00000492423 GJA5P36382 358 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 NAPAP54920 295 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 SNAP25P60880 206 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 DNM1Q05193 864 aaKnown RBP17.14■□□□□ 0.33
COPS7B-222ENST00000492423 PPIL2Q13356 520 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 BRAPQ7Z569 592 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 DAGLBQ8NCG7 672 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 TNFRSF25Q93038 417 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 COA7Q96BR5 231 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
COPS7B-222ENST00000492423 ATP6V1DQ9Y5K8 247 aa17.14■□□□□ 0.33
COPS7B-222ENST00000492423 A0A0G2JLL6 359 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-222ENST00000492423 IRF6O14896 467 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 TOMM70O94826 608 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 MCM4P33991 863 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 KRT2P35908 639 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 NLRP5P59047 1200 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 NR5A1Q13285 461 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 SAFBQ15424 915 aaKnown RBP eCLIP17.13■□□□□ 0.33
COPS7B-222ENST00000492423 PPP1R18Q6NYC8 613 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 PRRT2Q7Z6L0 340 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-222ENST00000492423 RBM46Q8TBY0 533 aaKnown RBP17.13■□□□□ 0.33
COPS7B-222ENST00000492423 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 ZMYND12Q9H0C1 365 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 FOXP1Q9H334 677 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-222ENST00000492423 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
COPS7B-222ENST00000492423 M0R2N6 131 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 TAL1P17542 331 aaPredicted RBP17.12■□□□□ 0.33
COPS7B-222ENST00000492423 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 CST9Q5W186 159 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
COPS7B-222ENST00000492423 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 TANGO6Q9C0B7 1094 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
COPS7B-222ENST00000492423 FAM205CA6NFA0 338 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 CXCL11O14625 94 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 CALML3P27482 149 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 NOM1Q5C9Z4 860 aaKnown RBP17.11■□□□□ 0.33
COPS7B-222ENST00000492423 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
COPS7B-222ENST00000492423 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 NOSTRINQ8IVI9 506 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 BLIDQ8IZY5 108 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 C2orf69Q8N8R5 385 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 PPP1R9AQ9ULJ8 1098 aa17.11■□□□□ 0.33
COPS7B-222ENST00000492423 SMCO2A6NFE2 343 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 FLOT1O75955 427 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 APLP1P51693 650 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 MOGSQ13724 837 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
COPS7B-222ENST00000492423 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
COPS7B-222ENST00000492423 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-222ENST00000492423 RASGRP4Q8TDF6 673 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 AMNQ9BXJ7 453 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 GDPD2Q9HCC8 539 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 ZNF536O15090 1300 aa17.1■□□□□ 0.33
COPS7B-222ENST00000492423 KRT85P78386 507 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
COPS7B-222ENST00000492423 C6orf50Q9HD87 102 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
COPS7B-222ENST00000492423 LCTP09848 1927 aa17.08■□□□□ 0.33
COPS7B-222ENST00000492423 MYPNQ86TC9 1320 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L15C9J2P7 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L13C9JLJ4 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L11C9JVI0 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L18D6R9N7 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L22D6RA61 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L17D6RBQ6 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L19D6RCP7 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L20D6RJB6 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 FIBPO43427 364 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 ADCY7P51828 1080 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms