RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SDE2Q6IQ49 451 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 TSPYL5Q86VY4 417 aaPredicted RBP6.12□□□□□ -1.43
RTN4-215ENST00000491592 CNPY4Q8N129 248 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 STK11IPQ8N1F8 1099 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 SYTL5Q8TDW5 730 aaPredicted RBP6.12□□□□□ -1.43
RTN4-215ENST00000491592 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 FGD4Q96M96 766 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 DEPDC7Q96QD5 511 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 BRINP2Q9C0B6 783 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 CHST7Q9NS84 486 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 APEX2Q9UBZ4 518 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 MINPP1Q9UNW1 487 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 FHOD1Q9Y613 1164 aa6.12□□□□□ -1.43
RTN4-215ENST00000491592 CECR2Q9BXF3 1484 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 MEIS1O00470 390 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 CREB3O43889 395 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 BMS1Q14692 1282 aaKnown RBP6.11□□□□□ -1.43
RTN4-215ENST00000491592 AOC3Q16853 763 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 EGFLAMQ63HQ2 1017 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 WFDC3Q8IUB2 231 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 ABI1Q8IZP0 508 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 ENOX1Q8TC92 643 aaKnown RBP6.11□□□□□ -1.43
RTN4-215ENST00000491592 BCL7CQ8WUZ0 217 aaPredicted RBP6.11□□□□□ -1.43
RTN4-215ENST00000491592 ASB11Q8WXH4 323 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 UBE2FQ969M7 185 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 SRPK1Q96SB4 655 aaKnown RBP6.11□□□□□ -1.43
RTN4-215ENST00000491592 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
RTN4-215ENST00000491592 ATP13A1Q9HD20 1204 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 ZSWIM5Q9P217 1185 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 DUSP13Q9UII6 198 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 VAV3Q9UKW4 847 aa6.11□□□□□ -1.43
RTN4-215ENST00000491592 WASH4PA8MWX3 477 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 PDPK1O15530 556 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 SH3BP5O60239 455 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 PPM1BO75688 479 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 PTMAP06454 111 aaKnown RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 TPP2P29144 1249 aaPredicted RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 LTKP29376 864 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 CD96P40200 585 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 ZNF445P59923 1031 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 IKZF1Q13422 519 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 NFE2L2Q16236 605 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 GAB4Q2WGN9 574 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 CCDC144BQ3MJ40 725 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 NOL9Q5SY16 702 aaKnown RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 CRTC3Q6UUV7 619 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 NME8Q8N427 588 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 FIBCD1Q8N539 461 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 DAGLBQ8NCG7 672 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 ST13P5Q8NFI4 369 aaPredicted RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 BRF1Q92994 677 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 MKL1Q969V6 931 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 GPATCH3Q96I76 525 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 EPN3Q9H201 632 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 ZSWIM4Q9H7M6 989 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 CCDC39Q9UFE4 941 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 CGGBP1Q9UFW8 167 aaPredicted RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 SLC5A6Q9Y289 635 aa6.1□□□□□ -1.43
RTN4-215ENST00000491592 NOP58Q9Y2X3 529 aaKnown RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 ARID1BQ8NFD5 2236 aaPredicted RBP6.1□□□□□ -1.43
RTN4-215ENST00000491592 TOP2AP11388 1531 aaKnown RBP6.09□□□□□ -1.43
RTN4-215ENST00000491592 H0Y8X5 98 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 PARNO95453 639 aaKnown RBP6.09□□□□□ -1.43
RTN4-215ENST00000491592 CTSKP43235 329 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 BNIP3Q12983 259 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 MTERF2Q49AM1 385 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 ZNF655Q8N720 491 aaPredicted RBP6.09□□□□□ -1.43
RTN4-215ENST00000491592 ZNF513Q8N8E2 541 aaPredicted RBP6.09□□□□□ -1.43
RTN4-215ENST00000491592 FLCNQ8NFG4 579 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 APBA2Q99767 749 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 PIF1Q9H611 641 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 KIF21BO75037 1637 aa6.09□□□□□ -1.43
RTN4-215ENST00000491592 CCDC88BA6NC98 1476 aa6.09□□□□□ -1.44
RTN4-215ENST00000491592 FAM221BA6H8Z2 402 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 IFRD2Q12894 506 aaPredicted RBP6.08□□□□□ -1.44
RTN4-215ENST00000491592 PPP2R5DQ14738 602 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 SV2CQ496J9 727 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 RNF187Q5TA31 235 aaPredicted RBP6.08□□□□□ -1.44
RTN4-215ENST00000491592 ANGEL2Q5VTE6 544 aaKnown RBP6.08□□□□□ -1.44
RTN4-215ENST00000491592 WDR78Q5VTH9 848 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 LRP10Q7Z4F1 713 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 ZNF227Q86WZ6 799 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 CREG2Q8IUH2 290 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 TP53INP2Q8IXH6 220 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 CRACR2BQ8N4Y2 399 aaPredicted RBP6.08□□□□□ -1.44
RTN4-215ENST00000491592 PPP1R14AQ96A00 147 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 TCTN2Q96GX1 697 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 ZDHHC15Q96MV8 337 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 FAN1Q9Y2M0 1017 aa6.08□□□□□ -1.44
RTN4-215ENST00000491592 SF3B6Q9Y3B4 125 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms