RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 CTAGE5O15320 804 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 PLA2G5P39877 138 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 GJA9P57773 515 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 OTOP2Q7RTS6 562 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 KIFC2Q96AC6 838 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 IL23AQ9NPF7 189 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 NCOR1O75376 2440 aa18.4■□□□□ 0.54
SCAMP3-208ENST00000490999 GREB1LQ9C091 1923 aaPredicted RBP18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 TLR3O15455 904 aaKnown RBP18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 MYOGP15173 224 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 CCL23P55773 120 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 TFF2Q03403 129 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 CXCL17Q6UXB2 119 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 HERVK_113Q902F9 699 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 HIPK3Q9H422 1215 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 SLC28A3Q9HAS3 691 aa18.39■□□□□ 0.53
SCAMP3-208ENST00000490999 F5H6K3 240 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 CD4P01730 458 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 RASA1P20936 1047 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 KLRC3Q07444 240 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 HSP90AB4PQ58FF6 505 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 ZNF467Q7Z7K2 595 aaPredicted RBP18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 KIF1BPQ96EK5 621 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 PUS7LQ9H0K6 701 aaKnown RBP18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 CTDP1Q9Y5B0 961 aaPredicted RBP18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 ASTN1O14525 1302 aa18.38■□□□□ 0.53
SCAMP3-208ENST00000490999 CNTN2Q02246 1040 aa18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 LRRC47Q8N1G4 583 aaKnown RBP18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 FAM122AQ96E09 287 aa18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 WNT8AQ9H1J5 351 aa18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 TRANK1O15050 2925 aa18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 GBF1Q92538 1859 aa18.37■□□□□ 0.53
SCAMP3-208ENST00000490999 LRRC37A2A6NM11 1700 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 MCM3APO60318 1980 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 ZBED4O75132 1171 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 FGBP02675 491 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 KCNQ1P51787 676 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 TLK2Q86UE8 772 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 PRPF38AQ8NAV1 312 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 CHMP4CQ96CF2 233 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 TRPV6Q9H1D0 765 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
SCAMP3-208ENST00000490999 ZBBXA8MT70 800 aa18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 PRDM1O75626 825 aa18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 PSMC6P62333 389 aa18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 HAUS7Q99871 368 aa18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
SCAMP3-208ENST00000490999 GRIN2DO15399 1336 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 B4GALT4O60513 344 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 UBE3CQ15386 1083 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 SCLYQ96I15 445 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
SCAMP3-208ENST00000490999 MINDY4BA8MYZ0 360 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 RFXAPO00287 272 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 ATP5JP18859 108 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 ITGA7Q13683 1181 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 FSCN1Q16658 493 aaKnown RBP18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 TMEM63BQ5T3F8 832 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 CERS4Q9HA82 394 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 FBXO40Q9UH90 709 aa18.33■□□□□ 0.52
SCAMP3-208ENST00000490999 MYO9BQ13459 2157 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 IGKV6D-41A0A0C4DH26 115 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 CCER2I3L3R5 266 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 BMP1P13497 986 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 SMPD1P17405 629 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 EEPD1Q7L9B9 569 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 FBXO16Q8IX29 292 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 CHST13Q8NET6 341 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 VWCEQ96DN2 955 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 EPB41L4AQ9HCS5 686 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 PDGFCQ9NRA1 345 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 SLC4A7Q9Y6M7 1214 aa18.32■□□□□ 0.52
SCAMP3-208ENST00000490999 KRT40Q6A162 431 aa18.31■□□□□ 0.52
SCAMP3-208ENST00000490999 FAM133AQ8N9E0 248 aa18.31■□□□□ 0.52
SCAMP3-208ENST00000490999 AGBL1Q96MI9 1066 aa18.31■□□□□ 0.52
SCAMP3-208ENST00000490999 TSPYL2Q9H2G4 693 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms