RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CCDC93Q567U6 631 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 TCERG1LQ5VWI1 586 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 USP37Q86T82 979 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 VSTM4Q8IW00 320 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.1
NPHP3-208ENST00000490993 MMRN2Q9H8L6 949 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 SAMM50Q9Y512 469 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 TACC1O75410 805 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 DNM2P50570 870 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 USP17L2Q6R6M4 530 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 TBCKQ8TEA7 893 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 STAMQ92783 540 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 FUCA2Q9BTY2 467 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 NUCKS1Q9H1E3 243 aaKnown RBP8.21□□□□□ -1.1
NPHP3-208ENST00000490993 DBNDD1Q9H9R9 158 aa8.21□□□□□ -1.1
NPHP3-208ENST00000490993 MRPL11Q9Y3B7 192 aaKnown RBP8.21□□□□□ -1.1
NPHP3-208ENST00000490993 CTAGE15A4D2H0 777 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 CTAGE8P0CG41 777 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 KARSQ15046 597 aaKnown RBP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 VWA3BQ502W6 1294 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 HHIPL2Q6UWX4 724 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 C15orf52Q6ZUT6 534 aaKnown RBP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 TMEM179Q6ZVK1 233 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 HS2ST1Q7LGA3 356 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 CTAGE6Q86UF2 777 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 CTAGE4Q8IX94 777 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 CACTINQ8WUQ7 758 aaKnown RBP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 GOLGA1Q92805 767 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 OSBPL5Q9H0X9 879 aaPredicted RBP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 SENP2Q9HC62 589 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 DISC1Q9NRI5 854 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 TAB2Q9NYJ8 693 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 NRBP1Q9UHY1 535 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 TUBE1Q9UJT0 475 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 PHLPP1O60346 1717 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 TRAF5O00463 557 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 IQCB1Q15051 598 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 SEC23AQ15436 765 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 ZNF827Q17R98 1081 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 EPSTI1Q96J88 318 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 FLT1P17948 1338 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 ERLIN2O94905 339 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 KRT13P13646 458 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 PRPHP41219 470 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 NTRK3Q16288 839 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 SPAG5Q96R06 1193 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 LRP6O75581 1613 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 ROBO1Q9Y6N7 1651 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 CETN3O15182 167 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 GYS1P13807 737 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 RASGRP4Q8TDF6 673 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 MAPK8IP1Q9UQF2 711 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 AHDC1Q5TGY3 1603 aaPredicted RBP8.2□□□□□ -1.1
NPHP3-208ENST00000490993 C5P01031 1676 aa8.2□□□□□ -1.1
NPHP3-208ENST00000490993 B4DLN1 442 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 TROAPQ12815 778 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 PSMD2Q13200 908 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 NCAPH2Q6IBW4 605 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 TBC1D5Q92609 795 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 SPTLC3Q9NUV7 552 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 CNTNAP5Q8WYK1 1306 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 KRT9P35527 623 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 TNNT3P45378 269 aaPredicted RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 LARP4BQ92615 738 aaKnown RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 THAP9Q9H5L6 903 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 RABGAP1Q9Y3P9 1069 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 DAGLAQ9Y4D2 1042 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 GCOM1H8Y6P7 765 aaPredicted RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 POLR2MP0CAP2 368 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 EPB41P11171 864 aaKnown RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 IL1R1P14778 569 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 ZNF569Q5MCW4 686 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 MYOCDQ8IZQ8 938 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 LZTFL1Q9NQ48 299 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 TMEM232C9JQI7 657 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 ZBTB5O15062 677 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 ZBED4O75132 1171 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 PTPAQ15257 358 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 TMEM132AQ24JP5 1023 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 USH1GQ495M9 461 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 STRIP1Q5VSL9 837 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 STYK1Q6J9G0 422 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 C3orf67Q6ZVT6 689 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 DAGLBQ8NCG7 672 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 OR8K1Q8NGG5 319 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 CSRNP1Q96S65 589 aa8.19□□□□□ -1.1
NPHP3-208ENST00000490993 SEPT11Q9NVA2 429 aaKnown RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 MARF1Q9Y4F3 1742 aaKnown RBP8.19□□□□□ -1.1
NPHP3-208ENST00000490993 USP17L5A8MUK1 530 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms