RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 INPP5BP32019 993 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 C2orf54Q08AI8 447 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 RRP12Q5JTH9 1297 aaKnown RBP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 METTL24Q5JXM2 366 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 WDR59Q6PJI9 974 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 SHISA4Q96DD7 197 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 LY75O60449 1722 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 PATL2C9JE40 543 aaKnown RBP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 MNAT1P51948 309 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 TSR1Q2NL82 804 aaKnown RBP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 ERFEQ4G0M1 354 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 IQCEQ6IPM2 695 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 MFSD6Q6ZSS7 791 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 PAXIP1Q6ZW49 1069 aaPredicted RBP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 SND1Q7KZF4 910 aaKnown RBP eCLIP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 TEX2Q8IWB9 1127 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 ARHGEF1Q92888 912 aaKnown RBP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 ZNF512BQ96KM6 892 aaPredicted RBP21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 VPS54Q9P1Q0 977 aa21.65■■□□□ 1.06
SNAPC3-206ENST00000490969 GOLGA8KD6RF30 607 aa21.64■■□□□ 1.06
SNAPC3-206ENST00000490969 USP8P40818 1118 aa21.64■■□□□ 1.06
SNAPC3-206ENST00000490969 AMOTL1Q8IY63 956 aa21.64■■□□□ 1.06
SNAPC3-206ENST00000490969 FANCBQ8NB91 859 aa21.64■■□□□ 1.06
SNAPC3-206ENST00000490969 NUP133Q8WUM0 1156 aa21.64■■□□□ 1.06
SNAPC3-206ENST00000490969 SH3GL2Q99962 352 aa21.64■■□□□ 1.06
SNAPC3-206ENST00000490969 ANO9A1A5B4 782 aa21.64■■□□□ 1.05
SNAPC3-206ENST00000490969 BMP15O95972 392 aa21.64■■□□□ 1.05
SNAPC3-206ENST00000490969 CCDC70Q6NSX1 233 aa21.64■■□□□ 1.05
SNAPC3-206ENST00000490969 MB21D1Q8N884 522 aa21.64■■□□□ 1.05
SNAPC3-206ENST00000490969 VGLL2Q8N8G2 317 aa21.64■■□□□ 1.05
SNAPC3-206ENST00000490969 CNNM1Q9NRU3 951 aa21.64■■□□□ 1.05
SNAPC3-206ENST00000490969 WNT7AO00755 349 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 MYH6P13533 1939 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 PARP10Q53GL7 1025 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 RC3H1Q5TC82 1133 aaKnown RBP21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 LACRTQ9GZZ8 138 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 CAPN11Q9UMQ6 739 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 IDEP14735 1019 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 KRT2P35908 639 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 KRT27Q7Z3Y8 459 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 ANKRD18AQ8IVF6 992 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 RRP36Q96EU6 259 aaKnown RBP21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 HINFPQ9BQA5 517 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 JADE2Q9NQC1 790 aa21.63■■□□□ 1.05
SNAPC3-206ENST00000490969 ERICH2A1L162 156 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 RCCD1A6NED2 376 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 GTPBP6O43824 516 aaPredicted RBP21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 PARP1P09874 1014 aaKnown RBP21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 ZNF658Q5TYW1 1059 aaPredicted RBP21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 FAM196AQ6ZSG2 479 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 IRF2BP1Q8IU81 584 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 ZNF654Q8IZM8 581 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 A0A1W2PQC6 194 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 LGALS16A8MUM7 142 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 ZNF174Q15697 407 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 PDXDC2PQ6P474 469 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 CNPY4Q8N129 248 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 MTRQ99707 1265 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 RNF26Q9BY78 433 aaPredicted RBP21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 MAPK8IP1Q9UQF2 711 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 SAMM50Q9Y512 469 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 MYH13Q9UKX3 1938 aa21.62■■□□□ 1.05
SNAPC3-206ENST00000490969 WTIPA6NIX2 430 aaPredicted RBP21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 OPA1O60313 960 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 XBP1P17861 261 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 MEA1Q16626 185 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 TTC19Q6DKK2 380 aaPredicted RBP21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 CLEC4GQ6UXB4 293 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 NARFQ9UHQ1 456 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 TIAM2Q8IVF5 1701 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 H7C1D1 291 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 MBD4O95243 580 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 TMTC2Q8N394 836 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 MMGT1Q8N4V1 131 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 PHF20Q9BVI0 1012 aa21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 RTCBQ9Y3I0 505 aaKnown RBP21.61■■□□□ 1.05
SNAPC3-206ENST00000490969 PES1O00541 588 aaKnown RBP21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 CHRM1P11229 460 aaPredicted RBP21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 RCAN1P53805 252 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 CXorf56Q9H5V9 222 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 ZNF652Q9Y2D9 606 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 GDAQ9Y2T3 454 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 MAP2K2P36507 400 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 PRCPP42785 496 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 EZH2Q15910 746 aaKnown RBP21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 PRPF38AQ8NAV1 312 aaKnown RBP21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 ZNF507Q8TCN5 953 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 HDAC7Q8WUI4 952 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 STAG1Q8WVM7 1258 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 PURBQ96QR8 312 aaKnown RBP21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 RMND1Q9NWS8 449 aa21.6■■□□□ 1.05
SNAPC3-206ENST00000490969 IPO7O95373 1038 aaKnown RBP21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 EPB41P11171 864 aaKnown RBP21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 SKOR1P84550 965 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 RUBCNQ92622 972 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 DMGDHQ9UI17 866 aaKnown RBP21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 DUSP10Q9Y6W6 482 aa21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 ATXN2Q99700 1313 aaKnown RBP21.59■■□□□ 1.05
SNAPC3-206ENST00000490969 RPN1P04843 607 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms