RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 STRNO43815 780 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 HOXD10P28358 340 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 AK2P54819 239 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 CCAR1Q8IX12 1150 aaKnown RBP18.39■□□□□ 0.53
TRA2A-208ENST00000490942 ABRAQ8N0Z2 381 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 CHST13Q8NET6 341 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
TRA2A-208ENST00000490942 ZBTB5O15062 677 aa18.38■□□□□ 0.53
TRA2A-208ENST00000490942 DHX16O60231 1041 aaKnown RBP18.38■□□□□ 0.53
TRA2A-208ENST00000490942 ST18O60284 1047 aa18.38■□□□□ 0.53
TRA2A-208ENST00000490942 PSMC4P43686 418 aa18.38■□□□□ 0.53
TRA2A-208ENST00000490942 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
TRA2A-208ENST00000490942 SNRNP48Q6IEG0 339 aaKnown RBP18.38■□□□□ 0.53
TRA2A-208ENST00000490942 COA7Q96BR5 231 aa18.38■□□□□ 0.53
TRA2A-208ENST00000490942 FAM217BQ9NTX9 383 aaPredicted RBP18.38■□□□□ 0.53
TRA2A-208ENST00000490942 RBM27Q9P2N5 1060 aaKnown RBP18.38■□□□□ 0.53
TRA2A-208ENST00000490942 TNPO2O14787 897 aaKnown RBP18.37■□□□□ 0.53
TRA2A-208ENST00000490942 CYTH3O43739 400 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 ERCC3P19447 782 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 RXRAP19793 462 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 MCM2P49736 904 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 PLS1Q14651 629 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 PKN2Q16513 984 aaKnown RBP18.37■□□□□ 0.53
TRA2A-208ENST00000490942 SAMD1Q6SPF0 538 aaPredicted RBP18.37■□□□□ 0.53
TRA2A-208ENST00000490942 PLEKHH3Q7Z736 793 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 SOCS4Q8WXH5 440 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 PORCNQ9H237 461 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 EFCC1Q9HA90 598 aa18.37■□□□□ 0.53
TRA2A-208ENST00000490942 RAVER2Q9HCJ3 691 aaKnown RBP18.37■□□□□ 0.53
TRA2A-208ENST00000490942 PNMA6FA0A0J9YX94 578 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 PFKFB2O60825 505 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 FMNL1O95466 1100 aaPredicted RBP18.36■□□□□ 0.53
TRA2A-208ENST00000490942 FUT2Q10981 343 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 SLC35G1Q2M3R5 365 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 CPLX2Q6PUV4 134 aaKnown RBP18.36■□□□□ 0.53
TRA2A-208ENST00000490942 GPR142Q7Z601 462 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 CTU1Q7Z7A3 348 aaKnown RBP18.36■□□□□ 0.53
TRA2A-208ENST00000490942 NBPF11Q86T75 865 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 TEX2Q8IWB9 1127 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 CPXCR1Q8N123 301 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 SRBD1Q8N5C6 995 aaKnown RBP18.36■□□□□ 0.53
TRA2A-208ENST00000490942 CD99L2Q8TCZ2 262 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 RRP36Q96EU6 259 aaKnown RBP18.36■□□□□ 0.53
TRA2A-208ENST00000490942 TRIM47Q96LD4 638 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 AMNQ9BXJ7 453 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 CCPG1Q9ULG6 757 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 TPCN1Q9ULQ1 816 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 LIMCH1Q9UPQ0 1083 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 IVNS1ABPQ9Y6Y0 642 aa18.36■□□□□ 0.53
TRA2A-208ENST00000490942 ABCB11O95342 1321 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 SLC15A5A6NIM6 579 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 PLEKHA8P1O95397 391 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 IFNAR1P17181 557 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 CTGFP29279 349 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 CDC27P30260 824 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 IRF5Q13568 498 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 QRICH1Q2TAL8 776 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 NCAPG2Q86XI2 1143 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 ZSCAN31Q96LW9 406 aaPredicted RBP18.35■□□□□ 0.53
TRA2A-208ENST00000490942 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
TRA2A-208ENST00000490942 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
TRA2A-208ENST00000490942 SRRDQ9UH36 339 aa18.35■□□□□ 0.53
TRA2A-208ENST00000490942 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
TRA2A-208ENST00000490942 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 hCG_1984214I3L0E3 225 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 PEX10O60683 326 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 FCER1AP12319 257 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 PTPREP23469 700 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 GRB14Q14449 540 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 NTRK3Q16288 839 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 CCDC174Q6PII3 467 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 OTOP1Q7RTM1 612 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 FBXO11Q86XK2 927 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 SAMD3Q8N6K7 520 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 ZNF713Q8N859 430 aaPredicted RBP18.34■□□□□ 0.53
TRA2A-208ENST00000490942 AGBL1Q96MI9 1066 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 PIGSQ96S52 555 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 RNF26Q9BY78 433 aaPredicted RBP18.34■□□□□ 0.53
TRA2A-208ENST00000490942 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
TRA2A-208ENST00000490942 VAT1LQ9HCJ6 419 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 SH2B1Q9NRF2 756 aaPredicted RBP18.34■□□□□ 0.53
TRA2A-208ENST00000490942 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
TRA2A-208ENST00000490942 COL11A1P12107 1806 aaPredicted RBP18.34■□□□□ 0.53
TRA2A-208ENST00000490942 CDKL5O76039 1030 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 HOXC6P09630 235 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 XRCC5P13010 732 aaKnown RBP18.33■□□□□ 0.52
TRA2A-208ENST00000490942 ADD1P35611 737 aaKnown RBP18.33■□□□□ 0.52
TRA2A-208ENST00000490942 KCTD2Q14681 263 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 MORN1Q5T089 497 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 USP6NLQ92738 828 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 TRERF1Q96PN7 1200 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 NUDT12Q9BQG2 462 aa18.33■□□□□ 0.52
TRA2A-208ENST00000490942 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms