RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 CMA1P23946 247 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 MCM7P33993 719 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SLC1A4P43007 532 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SASS6Q6UVJ0 657 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SPICE1Q8N0Z3 855 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 MKL1Q969V6 931 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 SH3GLB2Q9NR46 395 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
HDAC9-225ENST00000490851 GREB1LQ9C091 1923 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-225ENST00000490851 CCDC194A0A1B0GVG4 234 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 SMCO2A6NFE2 343 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 CUTAO60888 179 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 ZNF202O95125 648 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 SYKP43405 635 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 SNAP25P60880 206 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 SIAH1Q8IUQ4 282 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 FHDC1Q9C0D6 1143 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 FBXO2Q9UK22 296 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 ZYXQ15942 572 aaKnown RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 INF2Q27J81 1249 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 RIOX1Q9H6W3 641 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 JMJD4Q9H9V9 463 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
HDAC9-225ENST00000490851 PCDHA6Q9UN73 950 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 PCDHA8Q9Y5H6 950 aa11.49□□□□□ -0.57
HDAC9-225ENST00000490851 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 ECE1P42892 770 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
HDAC9-225ENST00000490851 PTGDRQ13258 359 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 RASA3Q14644 834 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 RESP18Q5W5W9 173 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
HDAC9-225ENST00000490851 PDILTQ8N807 584 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 MTMR14Q8NCE2 650 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 CSRNP2Q9H175 543 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 A0A1W2PRG0 241 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 F5H6K3 240 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 PTPREP23469 700 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 KLRC3Q07444 240 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 GPATCH4Q5T3I0 446 aaKnown RBP11.48□□□□□ -0.57
HDAC9-225ENST00000490851 JAKMIP3Q5VZ66 844 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 USP49Q70CQ1 688 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 ZBED3Q96IU2 234 aaPredicted RBP11.48□□□□□ -0.57
HDAC9-225ENST00000490851 C6orf50Q9HD87 102 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 TMEM260Q9NX78 707 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
HDAC9-225ENST00000490851 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
HDAC9-225ENST00000490851 LTBP3Q9NS15 1303 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 VWA3AA6NCI4 1184 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 BIN1O00499 593 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-225ENST00000490851 NDUFB10O96000 172 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 MYBPC2Q14324 1141 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
HDAC9-225ENST00000490851 CCDC12Q8WUD4 166 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-225ENST00000490851 TSPAN18Q96SJ8 248 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-225ENST00000490851 FZD9O00144 591 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 CTAGE5O15320 804 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 ZNF280AP59817 542 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-225ENST00000490851 MTA1Q13330 715 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 ZMYND12Q9H0C1 365 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 TSPYL1Q9H0U9 437 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 USP25Q9UHP3 1055 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
HDAC9-225ENST00000490851 SRPRBQ9Y5M8 271 aaKnown RBP11.47□□□□□ -0.57
HDAC9-225ENST00000490851 PNMA6FA0A0J9YX94 578 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 M0R2N6 131 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 TAL1P17542 331 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-225ENST00000490851 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
HDAC9-225ENST00000490851 SMARCA1P28370 1054 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 TNNI2P48788 182 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 KIF4BQ2VIQ3 1234 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 LONRF3Q496Y0 759 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 ISM2Q6H9L7 571 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 FAM83AQ86UY5 434 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 LUZP1Q86V48 1076 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 DCAF4Q8WV16 495 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 FAM13BQ9NYF5 915 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 HACL1Q9UJ83 578 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 HPSEQ9Y251 543 aa11.46□□□□□ -0.57
HDAC9-225ENST00000490851 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.58
HDAC9-225ENST00000490851 GNA11P29992 359 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 ADCY7P51828 1080 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 UBE2SQ16763 222 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms