RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ACAD9Q9H845 621 aa36.93■■■■□ 3.5
LDB1-204ENST00000490751 RNF146Q9NTX7 359 aa36.93■■■■□ 3.5
LDB1-204ENST00000490751 CTNNA3Q9UI47 895 aa36.93■■■■□ 3.5
LDB1-204ENST00000490751 FRMPD2Q68DX3 1309 aaPredicted RBP36.92■■■■□ 3.5
LDB1-204ENST00000490751 LRRC26Q2I0M4 334 aa36.92■■■■□ 3.5
LDB1-204ENST00000490751 ZKSCAN3Q9BRR0 538 aa36.92■■■■□ 3.5
LDB1-204ENST00000490751 RBM27Q9P2N5 1060 aaKnown RBP36.92■■■■□ 3.5
LDB1-204ENST00000490751 ZMYND8Q9ULU4 1186 aaPredicted RBP36.92■■■■□ 3.5
LDB1-204ENST00000490751 CNPY2Q9Y2B0 182 aa36.92■■■■□ 3.5
LDB1-204ENST00000490751 RAD50Q92878 1312 aa36.91■■■■□ 3.5
LDB1-204ENST00000490751 SYNGAP1Q96PV0 1343 aa36.91■■■■□ 3.5
LDB1-204ENST00000490751 KDM4AO75164 1064 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 MYCNP04198 464 aaPredicted RBP36.9■■■■□ 3.5
LDB1-204ENST00000490751 ZNF865P0CJ78 1059 aaPredicted RBP36.9■■■■□ 3.5
LDB1-204ENST00000490751 PDHBP11177 359 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 ALAS1P13196 640 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 SLC16A2P36021 539 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 NT5C2P49902 561 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 TKFCQ3LXA3 575 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 MAMDC4Q6UXC1 1216 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 BTNL9Q6UXG8 535 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 ZNF467Q7Z7K2 595 aaPredicted RBP36.9■■■■□ 3.5
LDB1-204ENST00000490751 GPCPD1Q9NPB8 672 aa36.9■■■■□ 3.5
LDB1-204ENST00000490751 MCM3APO60318 1980 aa36.89■■■■□ 3.5
LDB1-204ENST00000490751 FGD4Q96M96 766 aa36.89■■■■□ 3.5
LDB1-204ENST00000490751 TRERF1Q96PN7 1200 aa36.89■■■■□ 3.5
LDB1-204ENST00000490751 PRO3102Q9H379 93 aa36.89■■■■□ 3.5
LDB1-204ENST00000490751 B4E1Z4 1266 aa36.88■■■■□ 3.49
LDB1-204ENST00000490751 KBTBD13C9JR72 458 aa36.88■■■■□ 3.49
LDB1-204ENST00000490751 SNAI1O95863 264 aaPredicted RBP36.88■■■■□ 3.49
LDB1-204ENST00000490751 RARBP10826 455 aa36.88■■■■□ 3.49
LDB1-204ENST00000490751 SYDE2Q5VT97 1194 aa36.88■■■■□ 3.49
LDB1-204ENST00000490751 RANBP17Q9H2T7 1088 aaKnown RBP36.88■■■■□ 3.49
LDB1-204ENST00000490751 TRIOBPQ9H2D6 2365 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 AKR1A1P14550 325 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 SYN1P17600 705 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 CHMLP26374 656 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 IQCA1Q86XH1 822 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 DGKHQ86XP1 1220 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 A1CFQ9NQ94 594 aaKnown RBP36.87■■■■□ 3.49
LDB1-204ENST00000490751 XPNPEP3Q9NQH7 507 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 CCPG1Q9ULG6 757 aa36.87■■■■□ 3.49
LDB1-204ENST00000490751 LRRC41Q15345 812 aa36.86■■■■□ 3.49
LDB1-204ENST00000490751 RUFY2Q8WXA3 655 aa36.86■■■■□ 3.49
LDB1-204ENST00000490751 ZHX1Q9UKY1 873 aaPredicted RBP36.86■■■■□ 3.49
LDB1-204ENST00000490751 POTEB2H3BUK9 544 aa36.85■■■■□ 3.49
LDB1-204ENST00000490751 ICAM1P05362 532 aa36.85■■■■□ 3.49
LDB1-204ENST00000490751 SNHG28P0DPA3 235 aa36.85■■■■□ 3.49
LDB1-204ENST00000490751 FXR1P51114 621 aaKnown RBP eCLIP36.85■■■■□ 3.49
LDB1-204ENST00000490751 ATN1P54259 1190 aaPredicted RBP36.85■■■■□ 3.49
LDB1-204ENST00000490751 CNTN2Q02246 1040 aa36.85■■■■□ 3.49
LDB1-204ENST00000490751 ZNF543Q08ER8 600 aa36.85■■■■□ 3.49
LDB1-204ENST00000490751 CCDC178Q5BJE1 867 aa36.85■■■■□ 3.49
LDB1-204ENST00000490751 CDKN2AIPQ9NXV6 580 aaPredicted RBP36.85■■■■□ 3.49
LDB1-204ENST00000490751 MUM1L1Q5H9M0 696 aa36.84■■■■□ 3.49
LDB1-204ENST00000490751 FAM133AQ8N9E0 248 aa36.84■■■■□ 3.49
LDB1-204ENST00000490751 LENG1Q96BZ8 264 aaPredicted RBP36.84■■■■□ 3.49
LDB1-204ENST00000490751 KRT23Q9C075 422 aa36.84■■■■□ 3.49
LDB1-204ENST00000490751 ZSWIM5Q9P217 1185 aa36.83■■■■□ 3.49
LDB1-204ENST00000490751 ARMCX2Q7L311 632 aa36.82■■■■□ 3.48
LDB1-204ENST00000490751 ZSCAN10Q96SZ4 725 aaPredicted RBP36.82■■■■□ 3.48
LDB1-204ENST00000490751 CNNM2Q9H8M5 875 aa36.82■■■■□ 3.48
LDB1-204ENST00000490751 FAM184BQ9ULE4 1060 aa36.82■■■■□ 3.48
LDB1-204ENST00000490751 PGK1P00558 417 aa36.81■■■■□ 3.48
LDB1-204ENST00000490751 ACVR2BQ13705 512 aa36.81■■■■□ 3.48
LDB1-204ENST00000490751 ADCYAP1R1P41586 468 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 CCDC144CPQ8IYA2 1237 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 PNMA1Q8ND90 353 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 ANKS1AQ92625 1134 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 GDF15Q99988 308 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 ABHD16BQ9H3Z7 469 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 KAT14Q9H8E8 782 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 TNKSO95271 1327 aa36.8■■■■□ 3.48
LDB1-204ENST00000490751 LCTP09848 1927 aa36.79■■■■□ 3.48
LDB1-204ENST00000490751 RANBP2P49792 3224 aaKnown RBP36.79■■■■□ 3.48
LDB1-204ENST00000490751 SOWAHBA6NEL2 793 aa36.79■■■■□ 3.48
LDB1-204ENST00000490751 NSMFQ6X4W1 530 aa36.79■■■■□ 3.48
LDB1-204ENST00000490751 RNF180Q86T96 592 aa36.79■■■■□ 3.48
LDB1-204ENST00000490751 ENAHQ8N8S7 591 aaPredicted RBP36.79■■■■□ 3.48
LDB1-204ENST00000490751 CYP39A1Q9NYL5 469 aa36.79■■■■□ 3.48
LDB1-204ENST00000490751 GOLGA8HP0CJ92 632 aa36.78■■■■□ 3.48
LDB1-204ENST00000490751 RTP1P59025 263 aa36.78■■■■□ 3.48
LDB1-204ENST00000490751 PTH1RQ03431 593 aa36.78■■■■□ 3.48
LDB1-204ENST00000490751 GPATCH4Q5T3I0 446 aaKnown RBP36.78■■■■□ 3.48
LDB1-204ENST00000490751 FERMT2Q96AC1 680 aa36.78■■■■□ 3.48
LDB1-204ENST00000490751 SLC39A5Q6ZMH5 540 aa36.77■■■■□ 3.48
LDB1-204ENST00000490751 UBAC1Q9BSL1 405 aa36.77■■■■□ 3.48
LDB1-204ENST00000490751 PCDH10Q9P2E7 1040 aa36.77■■■■□ 3.48
LDB1-204ENST00000490751 DNAH12Q6ZR08 3092 aa36.77■■■■□ 3.48
LDB1-204ENST00000490751 LRRC37A2A6NM11 1700 aa36.76■■■■□ 3.48
LDB1-204ENST00000490751 SGSM2O43147 1006 aa36.76■■■■□ 3.48
LDB1-204ENST00000490751 ADAMTS4O75173 837 aa36.76■■■■□ 3.48
LDB1-204ENST00000490751 MAGEA10P43363 369 aaPredicted RBP36.76■■■■□ 3.48
LDB1-204ENST00000490751 PHF24Q9UPV7 400 aa36.76■■■■□ 3.48
LDB1-204ENST00000490751 SYNRGQ9UMZ2 1314 aa36.76■■■■□ 3.47
LDB1-204ENST00000490751 A0A1W2PPC1 479 aa36.75■■■■□ 3.47
LDB1-204ENST00000490751 KATNBL1Q9H079 304 aa36.75■■■■□ 3.47
LDB1-204ENST00000490751 ATP11BQ9Y2G3 1177 aa36.75■■■■□ 3.47
LDB1-204ENST00000490751 ASB14A6NK59 587 aa36.74■■■■□ 3.47
LDB1-204ENST00000490751 CYP21A2P08686 494 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms