RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PRPF3O43395 683 aaKnown RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 AKR1B1P15121 316 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 PAK1Q13153 545 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 GOLGA6L10A6NI86 522 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 GADD45BO75293 160 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 TRAPPC10P48553 1259 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 IFI16Q16666 785 aaKnown RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 C12orf60Q5U649 245 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 FAM160B1Q5W0V3 765 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 HHIPL2Q6UWX4 724 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 FAM178BQ8IXR5 827 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 CLSTN2Q9H4D0 955 aa16.02■□□□□ 0.16
ARHGEF39-205ENST00000490638 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 RFX5P48382 616 aaPredicted RBP16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 UBE2SQ16763 222 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 PFKFB1P16118 471 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 GNG11P61952 73 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 PRPF38AQ8NAV1 312 aaKnown RBP16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 CLIC6Q96NY7 704 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 WDR11Q9BZH6 1224 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 TTC12Q9H892 705 aaPredicted RBP16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 FBXO40Q9UH90 709 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 PCDHB13Q9Y5F0 798 aa16.02■□□□□ 0.15
ARHGEF39-205ENST00000490638 SEPT7Q16181 437 aaKnown RBP16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 DCAF4Q8WV16 495 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 RAVER2Q9HCJ3 691 aaKnown RBP16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 SKILP12757 684 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 CASQ1P31415 396 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 HMGCS2P54868 508 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 CDC42EP5Q6NZY7 148 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 PLVAPQ9BX97 442 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 JADE2Q9NQC1 790 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 NFE2L3Q9Y4A8 694 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 GOLGA6L9A6NEM1 432 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 ACTN2P35609 894 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 PKP1Q13835 747 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 SPOUT1Q5T280 376 aaKnown RBP16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 SNRNP48Q6IEG0 339 aaKnown RBP16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 MSANTD4Q8NCY6 345 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 SLC7A3Q8WY07 619 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 ADPGKQ9BRR6 497 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 PXDNQ92626 1479 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 NEDD4P46934 1319 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
ARHGEF39-205ENST00000490638 KRT19P08727 400 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 KRT5P13647 590 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 DEFB129Q9H1M3 183 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 ENTPD3O75355 529 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
ARHGEF39-205ENST00000490638 POLLQ9UGP5 575 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 IGSF3O75054 1194 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 TMTC3Q6ZXV5 915 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 ELP3Q9H9T3 547 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
ARHGEF39-205ENST00000490638 C3P01024 1663 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 TNNI1P19237 187 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 SLC8A3P57103 927 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 RMDN3Q96TC7 470 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 COL4A3BPQ9Y5P4 624 aa16■□□□□ 0.15
ARHGEF39-205ENST00000490638 Q3C1V9 767 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 TAF3Q5VWG9 929 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 FAM151AQ8WW52 585 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 RNF146Q9NTX7 359 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZBTB5O15062 677 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 STX10O60499 249 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 CMA1P23946 247 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 KLRK1P26718 216 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZNF354CQ86Y25 554 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 AGBL3Q8NEM8 1001 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 FERMT1Q9BQL6 677 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 PCDHA7Q9UN72 937 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 RABGAP1Q9Y3P9 1069 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 CLIC4Q9Y696 253 aa15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 KARSQ15046 597 aaKnown RBP15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF39-205ENST00000490638 MMP1P03956 469 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 GJC1P36383 396 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 KIF5AQ12840 1032 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 SYNRGQ9UMZ2 1314 aa15.98■□□□□ 0.15
ARHGEF39-205ENST00000490638 FLT1P17948 1338 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms