RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RIPK3Q9Y572 518 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 CFAP54Q96N23 3096 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 PFKMP08237 780 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 KCNA5P22460 613 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 PTGS1P23219 599 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 NKX3-2P78367 333 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 HFE2Q6ZVN8 426 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
EXOSC3-207ENST00000490516 POTEB3A0JP26 581 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 ST18O60284 1047 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 IGSF3O75054 1194 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 CABYRO75952 493 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 CYP2D6P10635 497 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 CYP2C9P11712 490 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 AKR1B1P15121 316 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 SLC4A3P48751 1232 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 PTCRAQ6ISU1 281 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 POTEBQ6S5H4 581 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 ARMCX2Q7L311 632 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 KATNBL1Q9H079 304 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 MCM9Q9NXL9 1143 aa16.62■□□□□ 0.25
EXOSC3-207ENST00000490516 TANC1Q9C0D5 1861 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 KIF28PB7ZC32 967 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 ACTN1P12814 892 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 DYNLL2Q96FJ2 89 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 RIOK1Q9BRS2 568 aaKnown RBP16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 LMCD1Q9NZU5 365 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 ZNF536O15090 1300 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 SIP14410 1827 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 TRIOO75962 3097 aa16.61■□□□□ 0.25
EXOSC3-207ENST00000490516 PNMA6EA0A0J9YXQ4 647 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 RAD21O60216 631 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 TNFAIP2Q03169 654 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 FSCN1Q16658 493 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 TLK2Q86UE8 772 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 CCDC144CPQ8IYA2 1237 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 ZNF512BQ96KM6 892 aaPredicted RBP16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 TEX13BQ9BXU2 312 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 ALDH8A1Q9H2A2 487 aaPredicted RBP16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 TRMT13Q9NUP7 481 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 NOB1Q9ULX3 412 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
EXOSC3-207ENST00000490516 GRXCR2A6NFK2 248 aa16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 TMCO2Q7Z6W1 182 aaPredicted RBP16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 PRSS33Q8NF86 280 aa16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 MTUS1Q9ULD2 1270 aa16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
EXOSC3-207ENST00000490516 GNAI3P08754 354 aa16.58■□□□□ 0.24
EXOSC3-207ENST00000490516 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.24
EXOSC3-207ENST00000490516 SUGCTQ9HAC7 445 aa16.58■□□□□ 0.24
EXOSC3-207ENST00000490516 GPR108Q9NPR9 543 aa16.58■□□□□ 0.24
EXOSC3-207ENST00000490516 TLR7Q9NYK1 1049 aaKnown RBP16.58■□□□□ 0.24
EXOSC3-207ENST00000490516 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.24
EXOSC3-207ENST00000490516 MAGEB6P1A0A0J9YX57 407 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 DYNC1LI2O43237 492 aaPredicted RBP16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 CPXCR1Q8N123 301 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 ANKRD35Q8N283 1001 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 SDR42E1Q8WUS8 393 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 NUP88Q99567 741 aaPredicted RBP16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 FTOQ9C0B1 505 aaKnown RBP eCLIP16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 AP5M1Q9H0R1 490 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 SWAP70Q9UH65 585 aa16.57■□□□□ 0.24
EXOSC3-207ENST00000490516 TNKSO95271 1327 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 ZEB2O60315 1214 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 SMPD1P17405 629 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 CNTN2Q02246 1040 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 API5Q9BZZ5 524 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 GOPCQ9HD26 462 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 DBNLQ9UJU6 430 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
EXOSC3-207ENST00000490516 H3BQ06 376 aaPredicted RBP16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 SUPT20HL2P0C7V6 817 aa16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 FOXK2Q01167 660 aa16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 IER5LQ5T953 404 aa16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 RAVER2Q9HCJ3 691 aaKnown RBP16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 DCP1AQ9NPI6 582 aaPredicted RBP16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 TECTAO75443 2155 aa16.55■□□□□ 0.24
EXOSC3-207ENST00000490516 C5orf42Q9H799 3197 aa16.54■□□□□ 0.24
EXOSC3-207ENST00000490516 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms