RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 SYNPO2Q9UMS6 1093 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 SMIM22K7EJ46 135 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 APBB1O00213 710 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 CABYRO75952 493 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 FDX1P10109 184 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 SBK1Q52WX2 424 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 GIMAP6Q6P9H5 292 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 MKNK2Q9HBH9 465 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 MCM3APO60318 1980 aa23.59■■□□□ 1.37
UPK3B-205ENST00000490360 GRXCR1A8MXD5 290 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 NDUFB10O96000 172 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 CD4P01730 458 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 CPXCR1Q8N123 301 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 ADAMTS19Q8TE59 1207 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 NUP88Q99567 741 aaPredicted RBP23.58■■□□□ 1.37
UPK3B-205ENST00000490360 PPP1R12CQ9BZL4 782 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 SLC28A3Q9HAS3 691 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 SLC38A10Q9HBR0 1119 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 ZNF287Q9HBT7 754 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 FEM1BQ9UK73 627 aa23.58■■□□□ 1.37
UPK3B-205ENST00000490360 FGBP02675 491 aa23.57■■□□□ 1.36
UPK3B-205ENST00000490360 ARMCX2Q7L311 632 aa23.57■■□□□ 1.36
UPK3B-205ENST00000490360 ACRP10323 421 aa23.56■■□□□ 1.36
UPK3B-205ENST00000490360 RASA1P20936 1047 aa23.56■■□□□ 1.36
UPK3B-205ENST00000490360 SLC4A3P48751 1232 aa23.56■■□□□ 1.36
UPK3B-205ENST00000490360 SLFNL1Q499Z3 407 aa23.56■■□□□ 1.36
UPK3B-205ENST00000490360 MKL1Q969V6 931 aa23.56■■□□□ 1.36
UPK3B-205ENST00000490360 UHRF1Q96T88 793 aaPredicted RBP23.56■■□□□ 1.36
UPK3B-205ENST00000490360 MYH4Q9Y623 1939 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 ADCY6O43306 1168 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 IGFBP4P22692 258 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 CCDC144CPQ8IYA2 1237 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 SLC43A3Q8NBI5 491 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 KIFC2Q96AC6 838 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 HIPK3Q9H422 1215 aa23.55■■□□□ 1.36
UPK3B-205ENST00000490360 RAVER2Q9HCJ3 691 aaKnown RBP23.55■■□□□ 1.36
UPK3B-205ENST00000490360 CHD7Q9P2D1 2997 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 ZEB2O60315 1214 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 CYP2C18P33260 490 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 TNFAIP2Q03169 654 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 ADGRE1Q14246 886 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 RPUSD2Q8IZ73 545 aaKnown RBP23.54■■□□□ 1.36
UPK3B-205ENST00000490360 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 FGD4Q96M96 766 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 PUS7LQ9H0K6 701 aaKnown RBP23.54■■□□□ 1.36
UPK3B-205ENST00000490360 CLIP2Q9UDT6 1046 aa23.54■■□□□ 1.36
UPK3B-205ENST00000490360 ASB14A6NK59 587 aa23.53■■□□□ 1.36
UPK3B-205ENST00000490360 CTAGE5O15320 804 aa23.53■■□□□ 1.36
UPK3B-205ENST00000490360 AAK1Q2M2I8 961 aa23.53■■□□□ 1.36
UPK3B-205ENST00000490360 STRBPQ96SI9 672 aaKnown RBP23.53■■□□□ 1.36
UPK3B-205ENST00000490360 KATNBL1Q9H079 304 aa23.53■■□□□ 1.36
UPK3B-205ENST00000490360 CHMP4BQ9H444 224 aaKnown RBP23.53■■□□□ 1.36
UPK3B-205ENST00000490360 IRX5P78411 483 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-205ENST00000490360 CCDC85BQ15834 202 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-205ENST00000490360 NOL8Q76FK4 1167 aaKnown RBP23.52■■□□□ 1.36
UPK3B-205ENST00000490360 ZNF444Q8N0Y2 327 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-205ENST00000490360 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
UPK3B-205ENST00000490360 AP5M1Q9H0R1 490 aa23.52■■□□□ 1.36
UPK3B-205ENST00000490360 BCL11AQ9H165 835 aa23.52■■□□□ 1.36
UPK3B-205ENST00000490360 NKX2-4Q9H2Z4 354 aa23.52■■□□□ 1.36
UPK3B-205ENST00000490360 ACAD9Q9H845 621 aa23.52■■□□□ 1.36
UPK3B-205ENST00000490360 CXXC1Q9P0U4 656 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-205ENST00000490360 IGKV6D-41A0A0C4DH26 115 aa23.51■■□□□ 1.35
UPK3B-205ENST00000490360 ITGA7Q13683 1181 aa23.51■■□□□ 1.35
UPK3B-205ENST00000490360 FAM133AQ8N9E0 248 aa23.51■■□□□ 1.35
UPK3B-205ENST00000490360 DDX19BQ9UMR2 479 aa23.51■■□□□ 1.35
UPK3B-205ENST00000490360 Q9Y3F1 56 aa23.51■■□□□ 1.35
UPK3B-205ENST00000490360 GBF1Q92538 1859 aa23.51■■□□□ 1.35
UPK3B-205ENST00000490360 GSG1L2A8MUP6 293 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 MINDY4BA8MYZ0 360 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 TTLL1O95922 423 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 FSCN1Q16658 493 aaKnown RBP23.5■■□□□ 1.35
UPK3B-205ENST00000490360 TKFCQ3LXA3 575 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 CXCL17Q6UXB2 119 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 TLK2Q86UE8 772 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 C1QTNF1Q9BXJ1 281 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 MTMR4Q9NYA4 1195 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 GNEQ9Y223 722 aaKnown RBP23.5■■□□□ 1.35
UPK3B-205ENST00000490360 PCDHA11Q9Y5I1 949 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 SLC4A7Q9Y6M7 1214 aa23.5■■□□□ 1.35
UPK3B-205ENST00000490360 GNAT2P19087 354 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 PLA2G5P39877 138 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 BEX3Q00994 111 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 OTOP2Q7RTS6 562 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 SIRT2Q8IXJ6 389 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 CHURC1Q8WUH1 139 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 NOC4LQ9BVI4 516 aaKnown RBP23.49■■□□□ 1.35
UPK3B-205ENST00000490360 ZBTB40Q9NUA8 1239 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 YBX2Q9Y2T7 364 aaKnown RBP23.49■■□□□ 1.35
UPK3B-205ENST00000490360 TRANK1O15050 2925 aa23.49■■□□□ 1.35
UPK3B-205ENST00000490360 CHGBP05060 677 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 PFKMP08237 780 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 BMP3P12645 472 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 PPP2R2DQ66LE6 453 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 IQSEC1Q6DN90 963 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 FAM160B2Q86V87 743 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 CEP95Q96GE4 821 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 HOMER2Q9NSB8 354 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 COG6Q9Y2V7 657 aa23.48■■□□□ 1.35
UPK3B-205ENST00000490360 STAT2P52630 851 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms