RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 TMEM60Q9H2L4 133 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 DISC1Q9NRI5 854 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 STAT6P42226 847 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 CUL4BQ13620 913 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 SPATA1Q5VX52 437 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 DPF2Q92785 391 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
SNX5-214ENST00000490175 OR52Z1P0C646 297 aa18.19■□□□□ 0.5
SNX5-214ENST00000490175 CDK11BP21127 795 aaKnown RBP18.19■□□□□ 0.5
SNX5-214ENST00000490175 UBA7P41226 1012 aa18.19■□□□□ 0.5
SNX5-214ENST00000490175 RBM5P52756 815 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■■□ 23.8
SNX5-214ENST00000490175 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
SNX5-214ENST00000490175 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
SNX5-214ENST00000490175 ARMCX5Q6P1M9 558 aa18.19■□□□□ 0.5
SNX5-214ENST00000490175 CUEDC2Q9H467 287 aa18.19■□□□□ 0.5
SNX5-214ENST00000490175 FAM198AQ9UFP1 575 aa18.19■□□□□ 0.5
SNX5-214ENST00000490175 ADCY7P51828 1080 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 MKL1Q969V6 931 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 MED15Q96RN5 788 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 MAGEF1Q9HAY2 307 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 SYNRGQ9UMZ2 1314 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
SNX5-214ENST00000490175 PPP1R3GB7ZBB8 358 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 CCNT1O60563 726 aaKnown RBP18.18■□□□□ 0.5
SNX5-214ENST00000490175 AOC3Q16853 763 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
SNX5-214ENST00000490175 LETM2Q2VYF4 491 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 RRAGBQ5VZM2 374 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 CLEC10AQ8IUN9 316 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 ZFPM1Q8IX07 1006 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
SNX5-214ENST00000490175 CCDC112Q8NEF3 446 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 MTRQ99707 1265 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 ZMYND15Q9H091 742 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 DNAJC18Q9H819 358 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 JMJD4Q9H9V9 463 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 NYAP2Q9P242 653 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 PSME4Q14997 1843 aa18.18■□□□□ 0.5
SNX5-214ENST00000490175 CASP1P29466 404 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 KARSQ15046 597 aaKnown RBP18.17■□□□□ 0.5
SNX5-214ENST00000490175 TATDN1Q6P1N9 297 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 ADGRF4Q8IZF3 695 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 TBCKQ8TEA7 893 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 MTMR8Q96EF0 704 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 TRIM34Q9BYJ4 488 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
SNX5-214ENST00000490175 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
SNX5-214ENST00000490175 ENTPD3O75355 529 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 CD44P16070 742 aaKnown RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 EN1Q05925 392 aaPredicted RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 CERKLQ49MI3 558 aaPredicted RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 ZNF658Q5TYW1 1059 aaPredicted RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 RIC8AQ9NPQ8 531 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 BIN2Q9UBW5 565 aaPredicted RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 DDTLA6NHG4 134 aaPredicted RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 RPN1P04843 607 aaKnown RBP18.16■□□□□ 0.5
SNX5-214ENST00000490175 TCP10Q12799 353 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 RASSF8Q8NHQ8 419 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 BLZF1Q9H2G9 400 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 INTS13Q9NVM9 706 aa18.16■□□□□ 0.5
SNX5-214ENST00000490175 ZBTB5O15062 677 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 CDC25AP30304 524 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 NAALADL2Q58DX5 795 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 JAKMIP3Q5VZ66 844 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 CCAR2Q8N163 923 aaKnown RBP18.15■□□□□ 0.5
SNX5-214ENST00000490175 STAMQ92783 540 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 COA7Q96BR5 231 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 C16orf45Q96MC5 204 aaPredicted RBP18.15■□□□□ 0.5
SNX5-214ENST00000490175 CTAGE1Q96RT6 745 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 GLT8D2Q9H1C3 349 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 SAMSN1Q9NSI8 373 aaKnown RBP18.15■□□□□ 0.5
SNX5-214ENST00000490175 PCDHAC2Q9Y5I4 1007 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 CACNB3P54284 484 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 ATP2B2Q01814 1243 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 KCNB1Q14721 858 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 CDKAL1Q5VV42 579 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
SNX5-214ENST00000490175 KBTBD4Q9NVX7 518 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 RWDD2AQ9UIY3 292 aa18.15■□□□□ 0.5
SNX5-214ENST00000490175 A0A1B0GTH6 734 aa18.14■□□□□ 0.49
SNX5-214ENST00000490175 PSDA5PKW4 1024 aaPredicted RBP18.14■□□□□ 0.49
SNX5-214ENST00000490175 TNNT1P13805 278 aa18.14■□□□□ 0.49
SNX5-214ENST00000490175 TBX2Q13207 712 aaPredicted RBP18.14■□□□□ 0.49
SNX5-214ENST00000490175 SPECC1LQ69YQ0 1117 aa18.14■□□□□ 0.49
SNX5-214ENST00000490175 KLHL10Q6JEL2 608 aa18.14■□□□□ 0.49
SNX5-214ENST00000490175 TMEM179Q6ZVK1 233 aa18.14■□□□□ 0.49
SNX5-214ENST00000490175 CABP7Q86V35 215 aa18.14■□□□□ 0.49
SNX5-214ENST00000490175 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
SNX5-214ENST00000490175 EEF2P13639 858 aaKnown RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 MRPL12P52815 198 aaKnown RBP18.13■□□□□ 0.49
SNX5-214ENST00000490175 NR1I3Q14994 352 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms