RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 GP6Q9HCN6 339 aa5.43□□□□□ -1.54
CPSF3-205ENST00000489629 GINM1Q9NU53 330 aa5.43□□□□□ -1.54
CPSF3-205ENST00000489629 H0Y8X5 98 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 CD247P20963 164 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 PAK2Q13177 524 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 LAPTM5Q13571 262 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 COL9A2Q14055 689 aaPredicted RBP5.42□□□□□ -1.54
CPSF3-205ENST00000489629 SSPNQ14714 243 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 ZNF654Q8IZM8 581 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 JMJD8Q96S16 334 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 DSCC1Q9BVC3 393 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 KLHL14Q9P2G3 628 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 RAPGEFL1Q9UHV5 662 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 ZNF214Q9UL59 606 aaPredicted RBP5.42□□□□□ -1.54
CPSF3-205ENST00000489629 ZNF451Q9Y4E5 1061 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 KCTD3Q9Y597 815 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 TAF6LQ9Y6J9 622 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 LTBP3Q9NS15 1303 aa5.42□□□□□ -1.54
CPSF3-205ENST00000489629 PRKCAP17252 672 aa5.41□□□□□ -1.54
CPSF3-205ENST00000489629 SOX9P48436 509 aa5.41□□□□□ -1.54
CPSF3-205ENST00000489629 FBXW10Q5XX13 1052 aa5.41□□□□□ -1.54
CPSF3-205ENST00000489629 RASGRP4Q8TDF6 673 aa5.41□□□□□ -1.54
CPSF3-205ENST00000489629 TNFRSF12AQ9NP84 129 aa5.41□□□□□ -1.54
CPSF3-205ENST00000489629 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
CPSF3-205ENST00000489629 FHOD1Q9Y613 1164 aa5.41□□□□□ -1.54
CPSF3-205ENST00000489629 ABLIM1O14639 778 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 IRS4O14654 1257 aaPredicted RBP5.4□□□□□ -1.54
CPSF3-205ENST00000489629 N4BP3O15049 544 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 FGF10O15520 208 aaPredicted RBP5.4□□□□□ -1.54
CPSF3-205ENST00000489629 CBFA2T2O43439 604 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 TP53P04637 393 aaPredicted RBP5.4□□□□□ -1.54
CPSF3-205ENST00000489629 GSTM1P09488 218 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 CDR1P51861 262 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 EPHB3P54753 998 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 CYP4F8P98187 520 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 MVKQ03426 396 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 CBX2Q14781 532 aaPredicted RBP5.4□□□□□ -1.54
CPSF3-205ENST00000489629 ZNF385BQ569K4 471 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 CCDC81Q6ZN84 652 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 NUP43Q8NFH3 380 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 BRF1Q92994 677 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 EPB41L4AQ9HCS5 686 aaPredicted RBP5.4□□□□□ -1.54
CPSF3-205ENST00000489629 SIRT5Q9NXA8 310 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 IMPACTQ9P2X3 320 aa5.4□□□□□ -1.54
CPSF3-205ENST00000489629 A0A087WZG4 1122 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 MPOP05164 745 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 MSL3P1P0C860 447 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 GIPRP48546 466 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 HLA-DQA1Q5Y7H0 255 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 TMEFF1Q8IYR6 380 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 FIBCD1Q8N539 461 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 PANK1Q8TE04 598 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 SIGLEC10Q96LC7 697 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 SPATA32Q96LK8 384 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 FCRL3Q96P31 734 aaPredicted RBP5.39□□□□□ -1.55
CPSF3-205ENST00000489629 EFR3BQ9Y2G0 817 aa5.39□□□□□ -1.55
CPSF3-205ENST00000489629 INHBBP09529 407 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 PI3P19957 117 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 ARL4AP40617 200 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 HDLBPQ00341 1268 aaKnown RBP5.38□□□□□ -1.55
CPSF3-205ENST00000489629 NOL9Q5SY16 702 aaKnown RBP5.38□□□□□ -1.55
CPSF3-205ENST00000489629 CWF19L1Q69YN2 538 aaKnown RBP5.38□□□□□ -1.55
CPSF3-205ENST00000489629 LILRA6Q6PI73 481 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 C19orf47Q8N9M1 422 aaKnown RBP5.38□□□□□ -1.55
CPSF3-205ENST00000489629 DACT3Q96B18 629 aaPredicted RBP5.38□□□□□ -1.55
CPSF3-205ENST00000489629 GPRASP2Q96D09 838 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 FAM86C1Q9NVL1 165 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 ADAMTS20P59510 1910 aa5.38□□□□□ -1.55
CPSF3-205ENST00000489629 A0A1W2PQH9 124 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 RFXAPO00287 272 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 ITGA4P13612 1032 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 IFNGR1P15260 489 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 NOP2P46087 812 aaKnown RBP5.37□□□□□ -1.55
CPSF3-205ENST00000489629 GJA8P48165 433 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 EIF6P56537 245 aaKnown RBP5.37□□□□□ -1.55
CPSF3-205ENST00000489629 RAB3GAP1Q15042 981 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 OLFML2BQ68BL8 750 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 CYP2R1Q6VVX0 501 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 RPTNQ6XPR3 784 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 LDHDQ86WU2 507 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 IGDCC3Q8IVU1 814 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 OR6P1Q8NGX9 317 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 MZB1Q8WU39 189 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 C20orf173Q96LM9 149 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 HAUS7Q99871 368 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 MCMBPQ9BTE3 642 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 KLHL25Q9H0H3 589 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 NOL6Q9H6R4 1146 aaKnown RBP5.37□□□□□ -1.55
CPSF3-205ENST00000489629 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
CPSF3-205ENST00000489629 DIS3Q9Y2L1 958 aaKnown RBP5.37□□□□□ -1.55
CPSF3-205ENST00000489629 SF3B6Q9Y3B4 125 aaKnown RBP5.37□□□□□ -1.55
CPSF3-205ENST00000489629 IRAK3Q9Y616 596 aa5.37□□□□□ -1.55
CPSF3-205ENST00000489629 NUDT19A8MXV4 375 aa5.36□□□□□ -1.55
CPSF3-205ENST00000489629 HOXA5P20719 270 aa5.36□□□□□ -1.55
CPSF3-205ENST00000489629 TMEM62Q0P6H9 643 aa5.36□□□□□ -1.55
CPSF3-205ENST00000489629 TCEAL1Q15170 157 aa5.36□□□□□ -1.55
CPSF3-205ENST00000489629 GNPTABQ3T906 1256 aa5.36□□□□□ -1.55
CPSF3-205ENST00000489629 TCERG1LQ5VWI1 586 aa5.36□□□□□ -1.55
CPSF3-205ENST00000489629 TMC6Q7Z403 805 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms