RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 UBA7P41226 1012 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 ZNF592Q92610 1267 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 PANX2Q96RD6 677 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
COL9A1-208ENST00000489611 RIOX1Q9H6W3 641 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 PHLPP2Q6ZVD8 1323 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 GTF2IP78347 998 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 GABPAQ06546 454 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 IL17AQ16552 155 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 RRAGBQ5VZM2 374 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 PPP1R18Q6NYC8 613 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 ITIH6Q6UXX5 1313 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 MED15Q96RN5 788 aa16.89■□□□□ 0.29
COL9A1-208ENST00000489611 SAMSN1Q9NSI8 373 aaKnown RBP16.89■□□□□ 0.29
COL9A1-208ENST00000489611 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-208ENST00000489611 RPN1P04843 607 aaKnown RBP16.88■□□□□ 0.29
COL9A1-208ENST00000489611 TPM1P09493 284 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
COL9A1-208ENST00000489611 PAK1Q13153 545 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 STIM1Q13586 685 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
COL9A1-208ENST00000489611 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
COL9A1-208ENST00000489611 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
COL9A1-208ENST00000489611 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 TRIM14Q14142 442 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 NEK8Q86SG6 692 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 L2HGDHQ9H9P8 463 aa16.88■□□□□ 0.29
COL9A1-208ENST00000489611 AKR1B15C9JRZ8 316 aaPredicted RBP16.87■□□□□ 0.29
COL9A1-208ENST00000489611 SNHG28P0DPA3 235 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 FKBP1AP62942 108 aaKnown RBP16.87■□□□□ 0.29
COL9A1-208ENST00000489611 INF2Q27J81 1249 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 HOMER1Q86YM7 354 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 TMEM139Q8IV31 216 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 ZNF710Q8N1W2 664 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 TC2NQ8N9U0 490 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 SRRTQ9BXP5 876 aaKnown RBP16.87■□□□□ 0.29
COL9A1-208ENST00000489611 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 LIMA1Q9UHB6 759 aaKnown RBP16.87■□□□□ 0.29
COL9A1-208ENST00000489611 SERPINB13Q9UIV8 391 aa16.87■□□□□ 0.29
COL9A1-208ENST00000489611 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL9A1-208ENST00000489611 IGKV6D-41A0A0C4DH26 115 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 H7C1D1 291 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 SLU7O95391 586 aaKnown RBP16.86■□□□□ 0.29
COL9A1-208ENST00000489611 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 OR52Z1P0C646 297 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
COL9A1-208ENST00000489611 AMPD3Q01432 767 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 APTXQ7Z2E3 356 aaKnown RBP16.86■□□□□ 0.29
COL9A1-208ENST00000489611 CNGA4Q8IV77 575 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 REXO1Q8N1G1 1221 aaKnown RBP16.86■□□□□ 0.29
COL9A1-208ENST00000489611 PDCL2Q8N4E4 241 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 RASSF8Q8NHQ8 419 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 CCDC17Q96LX7 622 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 EHD4Q9H223 541 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 KBTBD4Q9NVX7 518 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
COL9A1-208ENST00000489611 G3V3G9 751 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 TTLL1O95922 423 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 PDHBP11177 359 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 PBX1P40424 430 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 GPATCH4Q5T3I0 446 aaKnown RBP16.86■□□□□ 0.29
COL9A1-208ENST00000489611 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 KLHL10Q6JEL2 608 aa16.86■□□□□ 0.29
COL9A1-208ENST00000489611 TGFB2P61812 414 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 USP17L2Q6R6M4 530 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
COL9A1-208ENST00000489611 TEKT1Q969V4 418 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 MTRQ99707 1265 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-208ENST00000489611 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 GLT8D2Q9H1C3 349 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 KCNQ5Q9NR82 932 aa16.85■□□□□ 0.29
COL9A1-208ENST00000489611 RHOBTB3O94955 611 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 PTGER2P43116 358 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 HDLBPQ00341 1268 aaKnown RBP16.84■□□□□ 0.29
COL9A1-208ENST00000489611 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
COL9A1-208ENST00000489611 AOC3Q16853 763 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 CC2D2BQ6DHV5 1058 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 RASGRP4Q8TDF6 673 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 NAP1L4Q99733 375 aaKnown RBP16.84■□□□□ 0.29
COL9A1-208ENST00000489611 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 DHX36Q9H2U1 1008 aaKnown RBP16.84■□□□□ 0.29
COL9A1-208ENST00000489611 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
COL9A1-208ENST00000489611 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 PPP2R2CQ9Y2T4 447 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms