RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 E7EWF7 191 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 PGK2P07205 417 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 IMMTQ16891 758 aaKnown RBP12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 ZNF792Q3KQV3 632 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 DCAF4Q8WV16 495 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 ESR2Q92731 530 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 TTC14Q96N46 770 aa12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
SCAMP4-208ENST00000489554 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 SEPT4O43236 478 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 CCDC178Q5BJE1 867 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 TRPV1Q8NER1 839 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 TMEM47Q9BQJ4 181 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 TINF2Q9BSI4 451 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
SCAMP4-208ENST00000489554 DNAJC25-GNG10A0A024R161 153 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 COL6A1P12109 1028 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 CPA1P15085 419 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 ANTXR2P58335 489 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 CCDC96Q2M329 555 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 TKFCQ3LXA3 575 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 MB21D2Q8IYB1 491 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
SCAMP4-208ENST00000489554 DNM1LO00429 736 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 EXOSC10Q01780 885 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 BTNL9Q6UXG8 535 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 IQCA1Q86XH1 822 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 DGKHQ86XP1 1220 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 ANKRD35Q8N283 1001 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 MTMR7Q9Y216 660 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 PFASO15067 1338 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
SCAMP4-208ENST00000489554 KDM4AO75164 1064 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 MAMDC4Q6UXC1 1216 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 NEK1Q96PY6 1258 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 KRT23Q9C075 422 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 ZNF536O15090 1300 aa12.34□□□□□ -0.43
SCAMP4-208ENST00000489554 B4E1Z4 1266 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 SLC34A2O95436 690 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 ICAM1P05362 532 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 SNHG28P0DPA3 235 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 RARBP10826 455 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 PDHBP11177 359 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 ALAS1P13196 640 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 CASTP20810 708 aaKnown RBP12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 RPS6KB1P23443 525 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 KRT32Q14532 448 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 GPATCH4Q5T3I0 446 aaKnown RBP12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 SYDE2Q5VT97 1194 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 C7orf61Q8IZ16 206 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 PNMA2Q9UL42 364 aa12.33□□□□□ -0.44
SCAMP4-208ENST00000489554 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ZNF865P0CJ78 1059 aaPredicted RBP12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 AKR1A1P14550 325 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 SLC16A2P36021 539 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 RABEP1Q15276 862 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ANO1Q5XXA6 986 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 TCEANC2Q96MN5 208 aa12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ZSCAN10Q96SZ4 725 aaPredicted RBP12.32□□□□□ -0.44
SCAMP4-208ENST00000489554 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms