RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 GUCD1Q96NT3 240 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
LINC00173-204ENST00000489452 STARD7Q9NQZ5 370 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 FBXO40Q9UH90 709 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 PLXNA1Q9UIW2 1896 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 DCDC2CA8MYV0 355 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
LINC00173-204ENST00000489452 DUSP11O75319 330 aaKnown RBP15.87■□□□□ 0.13
LINC00173-204ENST00000489452 EPHB4P54760 987 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 CCDC174Q6PII3 467 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 NOL8Q76FK4 1167 aaKnown RBP15.87■□□□□ 0.13
LINC00173-204ENST00000489452 ZNF467Q7Z7K2 595 aaPredicted RBP15.87■□□□□ 0.13
LINC00173-204ENST00000489452 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 NUP133Q8WUM0 1156 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 STAG1Q8WVM7 1258 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 FGD4Q96M96 766 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 ABHD16BQ9H3Z7 469 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 GREB1LQ9C091 1923 aaPredicted RBP15.87■□□□□ 0.13
LINC00173-204ENST00000489452 PRUNE2Q8WUY3 3088 aa15.87■□□□□ 0.13
LINC00173-204ENST00000489452 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 EYSQ5T1H1 3165 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 KIAA0355O15063 1070 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 ADCY6O43306 1168 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 ALAS1P13196 640 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 STAT2P52630 851 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 OAZ1P54368 228 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 FAAP100Q0VG06 881 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 GNASQ5JWF2 1037 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 ARMCX2Q7L311 632 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 CCDC144CPQ8IYA2 1237 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 SPC25Q9HBM1 224 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 TOMM22Q9NS69 142 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 SYNPO2Q9UMS6 1093 aa15.86■□□□□ 0.13
LINC00173-204ENST00000489452 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
LINC00173-204ENST00000489452 FOXP2O15409 715 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 FDX1P10109 184 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 RRP1P56182 461 aaKnown RBP15.85■□□□□ 0.13
LINC00173-204ENST00000489452 CCSAPQ6IQ19 270 aaPredicted RBP15.85■□□□□ 0.13
LINC00173-204ENST00000489452 RCSD1Q6JBY9 416 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 RASGRP2Q7LDG7 609 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 RNPC3Q96LT9 517 aaKnown RBP15.85■□□□□ 0.13
LINC00173-204ENST00000489452 GLT1D1Q96MS3 346 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 TRERF1Q96PN7 1200 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 ACAD9Q9H845 621 aa15.85■□□□□ 0.13
LINC00173-204ENST00000489452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00173-204ENST00000489452 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 MOXD2PA6NHM9 499 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 ASGR1P07306 291 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 FPGSQ05932 587 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 RRP12Q5JTH9 1297 aaKnown RBP15.84■□□□□ 0.13
LINC00173-204ENST00000489452 ANKRD33Q7Z3H0 272 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 PCSK9Q8NBP7 692 aaKnown RBP15.84■□□□□ 0.13
LINC00173-204ENST00000489452 TOX2Q96NM4 488 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
LINC00173-204ENST00000489452 A1CFQ9NQ94 594 aaKnown RBP15.84■□□□□ 0.13
LINC00173-204ENST00000489452 PRR12Q9ULL5 1215 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 ZNF536O15090 1300 aa15.84■□□□□ 0.13
LINC00173-204ENST00000489452 LTBP2Q14767 1821 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 GJA9P57773 515 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 BEX3Q00994 111 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 CCDC96Q2M329 555 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.83■□□□□ 0.12
LINC00173-204ENST00000489452 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 EVI5LQ96CN4 794 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 FAM227BQ96M60 508 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 PLIN4Q96Q06 1357 aa15.83■□□□□ 0.12
LINC00173-204ENST00000489452 MCM3APO60318 1980 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.82■□□□□ 0.12
LINC00173-204ENST00000489452 TIMP1P01033 207 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 PTGS1P23219 599 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 SLC16A2P36021 539 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 PDE1AP54750 535 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 SMAD3P84022 425 aaKnown RBP15.82■□□□□ 0.12
LINC00173-204ENST00000489452 TNFAIP2Q03169 654 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 TTBK2Q6IQ55 1244 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 NSMFQ6X4W1 530 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 EEPD1Q7L9B9 569 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 PURBQ96QR8 312 aaKnown RBP15.82■□□□□ 0.12
LINC00173-204ENST00000489452 KATNBL1Q9H079 304 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 TTYH1Q9H313 450 aaPredicted RBP15.82■□□□□ 0.12
LINC00173-204ENST00000489452 SALL3Q9BXA9 1300 aa15.82■□□□□ 0.12
LINC00173-204ENST00000489452 ASB14A6NK59 587 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 ARVCFO00192 962 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 DYNC1LI2O43237 492 aaPredicted RBP15.81■□□□□ 0.12
LINC00173-204ENST00000489452 ELP1O95163 1332 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 FGAP02671 866 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 CDK7P50613 346 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 TKFCQ3LXA3 575 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 MYLIPQ8WY64 445 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 UPF3AQ9H1J1 476 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms