RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FAM126BQ8IXS8 530 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 GLT1D1Q96MS3 346 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 MTIF3Q9H2K0 278 aaKnown RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 CERS4Q9HA82 394 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 MYO5AQ9Y4I1 1855 aaKnown RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 PCDHA11Q9Y5I1 949 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 ELP1O95163 1332 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 UMODL1Q5DID0 1318 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 ARVCFO00192 962 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 SEPT2Q15019 361 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 GORABQ5T7V8 394 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 MB21D1Q8N884 522 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 HLA-CQ95604 372 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 UIMC1Q96RL1 719 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 MMP19Q99542 508 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 SERPINB13Q9UIV8 391 aa11.25□□□□□ -0.61
SSBP1-212ENST00000489378 ASGR1P07306 291 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 SHMT1P34896 483 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 PROX2Q3B8N5 592 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 VWCEQ96DN2 955 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 FBXL18Q96ME1 805 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 CNPY2Q9Y2B0 182 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
SSBP1-212ENST00000489378 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-212ENST00000489378 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 ZDBF2Q9HCK1 2354 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-212ENST00000489378 ADCY6O43306 1168 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 FLOT1O75955 427 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 CD4P01730 458 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 CA3P07451 260 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 CST5P28325 142 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-212ENST00000489378 CCL23P55773 120 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 WNT2BQ93097 391 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 EHD4Q9H223 541 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 FAM184BQ9ULE4 1060 aa11.23□□□□□ -0.61
SSBP1-212ENST00000489378 ZBBXA8MT70 800 aa11.22□□□□□ -0.61
SSBP1-212ENST00000489378 TLR3O15455 904 aaKnown RBP11.22□□□□□ -0.61
SSBP1-212ENST00000489378 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
SSBP1-212ENST00000489378 ARHGEF15O94989 841 aa11.22□□□□□ -0.61
SSBP1-212ENST00000489378 SNAI1O95863 264 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-212ENST00000489378 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-212ENST00000489378 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
SSBP1-212ENST00000489378 KCTD2Q14681 263 aa11.22□□□□□ -0.61
SSBP1-212ENST00000489378 WNT8AQ9H1J5 351 aa11.22□□□□□ -0.61
SSBP1-212ENST00000489378 HIPK3Q9H422 1215 aa11.22□□□□□ -0.61
SSBP1-212ENST00000489378 DIS3Q9Y2L1 958 aaKnown RBP11.22□□□□□ -0.61
SSBP1-212ENST00000489378 SLC25A27O95847 323 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 CYP2E1P05181 493 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-212ENST00000489378 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 PLCD1P51178 756 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 SPICE1Q8N0Z3 855 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 MIGA1Q8NAN2 632 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
SSBP1-212ENST00000489378 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
SSBP1-212ENST00000489378 ZHX1Q9UKY1 873 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-212ENST00000489378 MCM3APO60318 1980 aa11.21□□□□□ -0.62
SSBP1-212ENST00000489378 DPYSL4O14531 572 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 CTAGE5O15320 804 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 CYP7A1P22680 504 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 USP5P45974 858 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 GRB10Q13322 594 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 GNASQ5JWF2 1037 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 GJD3Q8N144 294 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-212ENST00000489378 ANKS1AQ92625 1134 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
SSBP1-212ENST00000489378 NOC4LQ9BVI4 516 aaKnown RBP11.2□□□□□ -0.62
SSBP1-212ENST00000489378 UPF3AQ9H1J1 476 aaKnown RBP11.2□□□□□ -0.62
SSBP1-212ENST00000489378 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
SSBP1-212ENST00000489378 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
SSBP1-212ENST00000489378 GJA9P57773 515 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 TAP1Q03518 808 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 SIAH1Q8IUQ4 282 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 FAM178BQ8IXR5 827 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 SCLYQ96I15 445 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 FBXO28Q9NVF7 368 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 CFAP54Q96N23 3096 aa11.19□□□□□ -0.62
SSBP1-212ENST00000489378 USP34Q70CQ2 3546 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 GOLGA8CPA6NN73 597 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 SRGAP3O43295 1099 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 LPXNO60711 386 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 STAT3P40763 770 aa11.18□□□□□ -0.62
SSBP1-212ENST00000489378 BEX3Q00994 111 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms