RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 SYDE2Q5VT97 1194 aa28.14■■■□□ 2.1
PTPN18-213ENST00000489215 LHX8Q68G74 356 aa28.14■■■□□ 2.1
PTPN18-213ENST00000489215 ZNF467Q7Z7K2 595 aaPredicted RBP28.14■■■□□ 2.1
PTPN18-213ENST00000489215 RALYLQ86SE5 291 aaKnown RBP28.14■■■□□ 2.1
PTPN18-213ENST00000489215 TINF2Q9BSI4 451 aa28.14■■■□□ 2.1
PTPN18-213ENST00000489215 TNKSO95271 1327 aa28.14■■■□□ 2.09
PTPN18-213ENST00000489215 DNAJC25-GNG10A0A024R161 153 aa28.13■■■□□ 2.09
PTPN18-213ENST00000489215 ENAHQ8N8S7 591 aaPredicted RBP28.13■■■□□ 2.09
PTPN18-213ENST00000489215 NCOA7Q8NI08 942 aa28.13■■■□□ 2.09
PTPN18-213ENST00000489215 DPF3Q92784 378 aa28.13■■■□□ 2.09
PTPN18-213ENST00000489215 RANBP17Q9H2T7 1088 aaKnown RBP28.13■■■□□ 2.09
PTPN18-213ENST00000489215 GPCPD1Q9NPB8 672 aa28.13■■■□□ 2.09
PTPN18-213ENST00000489215 ZNF536O15090 1300 aa28.13■■■□□ 2.09
PTPN18-213ENST00000489215 ERICH2A1L162 156 aa28.12■■■□□ 2.09
PTPN18-213ENST00000489215 SEPT4O43236 478 aa28.12■■■□□ 2.09
PTPN18-213ENST00000489215 ICAM1P05362 532 aa28.12■■■□□ 2.09
PTPN18-213ENST00000489215 SART3Q15020 963 aaKnown RBP28.12■■■□□ 2.09
PTPN18-213ENST00000489215 IFIT1BQ5T764 474 aaKnown RBP28.12■■■□□ 2.09
PTPN18-213ENST00000489215 PAWRQ96IZ0 340 aaKnown RBP28.12■■■□□ 2.09
PTPN18-213ENST00000489215 TRERF1Q96PN7 1200 aa28.12■■■□□ 2.09
PTPN18-213ENST00000489215 ESYT1Q9BSJ8 1104 aa28.12■■■□□ 2.09
PTPN18-213ENST00000489215 PFASO15067 1338 aa28.12■■■□□ 2.09
PTPN18-213ENST00000489215 FRMPD2Q68DX3 1309 aaPredicted RBP28.12■■■□□ 2.09
PTPN18-213ENST00000489215 CENPBP07199 599 aaPredicted RBP28.11■■■□□ 2.09
PTPN18-213ENST00000489215 ERICH6BQ5W0A0 696 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 TTBK2Q6IQ55 1244 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 CCDC174Q6PII3 467 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 AGBL1Q96MI9 1066 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 RNF146Q9NTX7 359 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 CCPG1Q9ULG6 757 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 CNPY2Q9Y2B0 182 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 SYNGAP1Q96PV0 1343 aa28.11■■■□□ 2.09
PTPN18-213ENST00000489215 ALAS1P13196 640 aa28.1■■■□□ 2.09
PTPN18-213ENST00000489215 SLC16A2P36021 539 aa28.1■■■□□ 2.09
PTPN18-213ENST00000489215 ASPRV1Q53RT3 343 aa28.1■■■□□ 2.09
PTPN18-213ENST00000489215 MAMDC4Q6UXC1 1216 aa28.1■■■□□ 2.09
PTPN18-213ENST00000489215 HOMER2Q9NSB8 354 aa28.1■■■□□ 2.09
PTPN18-213ENST00000489215 RBM8AQ9Y5S9 174 aaKnown RBP28.1■■■□□ 2.09
PTPN18-213ENST00000489215 NR2E3Q9Y5X4 410 aa28.1■■■□□ 2.09
PTPN18-213ENST00000489215 E7EWF7 191 aa28.09■■■□□ 2.09
PTPN18-213ENST00000489215 ARRDC4Q8NCT1 418 aa28.09■■■□□ 2.09
PTPN18-213ENST00000489215 C11orf49Q9H6J7 331 aa28.09■■■□□ 2.09
PTPN18-213ENST00000489215 RASGRP2Q7LDG7 609 aa28.08■■■□□ 2.09
PTPN18-213ENST00000489215 TRPV1Q8NER1 839 aa28.08■■■□□ 2.09
PTPN18-213ENST00000489215 POTEB2H3BUK9 544 aa28.07■■■□□ 2.08
PTPN18-213ENST00000489215 PARP1P09874 1014 aaKnown RBP28.07■■■□□ 2.08
PTPN18-213ENST00000489215 MKI67P46013 3256 aaKnown RBP28.06■■■□□ 2.08
PTPN18-213ENST00000489215 SEC23AQ15436 765 aa28.06■■■□□ 2.08
PTPN18-213ENST00000489215 MTA3Q9BTC8 594 aa28.06■■■□□ 2.08
PTPN18-213ENST00000489215 LSG1Q9H089 658 aaKnown RBP28.06■■■□□ 2.08
PTPN18-213ENST00000489215 ANO2Q9NQ90 1003 aa28.06■■■□□ 2.08
PTPN18-213ENST00000489215 A1CFQ9NQ94 594 aaKnown RBP28.06■■■□□ 2.08
PTPN18-213ENST00000489215 WDR19Q8NEZ3 1342 aa28.06■■■□□ 2.08
PTPN18-213ENST00000489215 IFIT3O14879 490 aaKnown RBP28.05■■■□□ 2.08
PTPN18-213ENST00000489215 CDC45O75419 566 aa28.05■■■□□ 2.08
PTPN18-213ENST00000489215 FRMPD3Q5JV73 1810 aa28.05■■■□□ 2.08
PTPN18-213ENST00000489215 PRAMEF19Q5SWL8 479 aa28.05■■■□□ 2.08
PTPN18-213ENST00000489215 RNF20Q5VTR2 975 aa28.05■■■□□ 2.08
PTPN18-213ENST00000489215 CYB5R4Q7L1T6 521 aa28.05■■■□□ 2.08
PTPN18-213ENST00000489215 MAF1Q9H063 256 aa28.05■■■□□ 2.08
PTPN18-213ENST00000489215 ASB14A6NK59 587 aa28.04■■■□□ 2.08
PTPN18-213ENST00000489215 DNM1LO00429 736 aa28.04■■■□□ 2.08
PTPN18-213ENST00000489215 EVI5O60447 810 aa28.04■■■□□ 2.08
PTPN18-213ENST00000489215 AKR1A1P14550 325 aa28.04■■■□□ 2.08
PTPN18-213ENST00000489215 MNX1P50219 401 aaPredicted RBP28.04■■■□□ 2.08
PTPN18-213ENST00000489215 SNAP25P60880 206 aa28.04■■■□□ 2.08
PTPN18-213ENST00000489215 DIS3LQ8TF46 1054 aaKnown RBP28.04■■■□□ 2.08
PTPN18-213ENST00000489215 ABHD16BQ9H3Z7 469 aa28.04■■■□□ 2.08
PTPN18-213ENST00000489215 GOLGA8HP0CJ92 632 aa28.03■■■□□ 2.08
PTPN18-213ENST00000489215 RARBP10826 455 aa28.03■■■□□ 2.08
PTPN18-213ENST00000489215 WTAPQ15007 396 aa28.03■■■□□ 2.08
PTPN18-213ENST00000489215 FAM133AQ8N9E0 248 aa28.03■■■□□ 2.08
PTPN18-213ENST00000489215 COL6A1P12109 1028 aa28.02■■■□□ 2.08
PTPN18-213ENST00000489215 NECTIN1Q15223 517 aa28.02■■■□□ 2.08
PTPN18-213ENST00000489215 TMTC2Q8N394 836 aa28.02■■■□□ 2.08
PTPN18-213ENST00000489215 CYP39A1Q9NYL5 469 aa28.02■■■□□ 2.08
PTPN18-213ENST00000489215 ADD3Q9UEY8 706 aaKnown RBP28.02■■■□□ 2.08
PTPN18-213ENST00000489215 FAM184BQ9ULE4 1060 aa28.02■■■□□ 2.08
PTPN18-213ENST00000489215 LOC102724159A0A0B4J2E5 919 aa28.01■■■□□ 2.07
PTPN18-213ENST00000489215 ZNF865P0CJ78 1059 aaPredicted RBP28.01■■■□□ 2.07
PTPN18-213ENST00000489215 PWP2Q15269 919 aaKnown RBP28.01■■■□□ 2.07
PTPN18-213ENST00000489215 MUM1L1Q5H9M0 696 aa28.01■■■□□ 2.07
PTPN18-213ENST00000489215 NSMFQ6X4W1 530 aa28.01■■■□□ 2.07
PTPN18-213ENST00000489215 UBA5Q9GZZ9 404 aa28.01■■■□□ 2.07
PTPN18-213ENST00000489215 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.01■■■□□ 2.07
PTPN18-213ENST00000489215 KBTBD13C9JR72 458 aa28■■■□□ 2.07
PTPN18-213ENST00000489215 SNAI1O95863 264 aaPredicted RBP28■■■□□ 2.07
PTPN18-213ENST00000489215 MCM5P33992 734 aa28■■■□□ 2.07
PTPN18-213ENST00000489215 SKAP1Q86WV1 359 aa28■■■□□ 2.07
PTPN18-213ENST00000489215 ADGRF4Q8IZF3 695 aa28■■■□□ 2.07
PTPN18-213ENST00000489215 SMCHD1A6NHR9 2005 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 SLC27A2O14975 620 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 DHX16O60231 1041 aaKnown RBP27.99■■■□□ 2.07
PTPN18-213ENST00000489215 TRAF1Q13077 416 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 ACVR2BQ13705 512 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 TMEM67Q5HYA8 995 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 STOX1Q6ZVD7 989 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 ARMCX2Q7L311 632 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 RNF180Q86T96 592 aa27.99■■■□□ 2.07
PTPN18-213ENST00000489215 MB21D2Q8IYB1 491 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms