RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ATF7P17544 494 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-209ENST00000489180 CCT5P48643 541 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 MFSD14BQ5SR56 506 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 FBXO18Q8NFZ0 1043 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 CNOT6LQ96LI5 555 aaKnown RBP19.35■□□□□ 0.69
NPHP4-209ENST00000489180 TROVE2P10155 538 aaKnown RBP eCLIP19.34■□□□□ 0.69
NPHP4-209ENST00000489180 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
NPHP4-209ENST00000489180 CCDC117Q8IWD4 279 aaPredicted RBP19.34■□□□□ 0.69
NPHP4-209ENST00000489180 TCP1P17987 556 aaKnown RBP19.34■□□□□ 0.69
NPHP4-209ENST00000489180 CDC25BP30305 580 aa19.34■□□□□ 0.69
NPHP4-209ENST00000489180 MUM1Q2TAK8 710 aa19.34■□□□□ 0.69
NPHP4-209ENST00000489180 CACTINQ8WUQ7 758 aaKnown RBP19.34■□□□□ 0.69
NPHP4-209ENST00000489180 VCXQ9H320 206 aa19.34■□□□□ 0.69
NPHP4-209ENST00000489180 CARMIL3Q8ND23 1372 aa19.34■□□□□ 0.69
NPHP4-209ENST00000489180 AFAP1L2Q8N4X5 818 aa19.34■□□□□ 0.69
NPHP4-209ENST00000489180 DBNLQ9UJU6 430 aaKnown RBP19.34■□□□□ 0.69
NPHP4-209ENST00000489180 TESPA1A2RU30 521 aaPredicted RBP19.33■□□□□ 0.69
NPHP4-209ENST00000489180 ARHGAP42A6NI28 874 aa19.33■□□□□ 0.69
NPHP4-209ENST00000489180 SESN3P58005 492 aa19.33■□□□□ 0.69
NPHP4-209ENST00000489180 RPS8P62241 208 aaKnown RBP19.33■□□□□ 0.69
NPHP4-209ENST00000489180 SCYL2Q6P3W7 929 aa19.33■□□□□ 0.69
NPHP4-209ENST00000489180 P3H4Q92791 437 aa19.33■□□□□ 0.69
NPHP4-209ENST00000489180 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.33■□□□□ 0.69
NPHP4-209ENST00000489180 THAP12O43422 761 aa19.33■□□□□ 0.69
NPHP4-209ENST00000489180 SRGAP1Q7Z6B7 1085 aa19.33■□□□□ 0.69
NPHP4-209ENST00000489180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.33■□□□□ 0.69
NPHP4-209ENST00000489180 ZNF526Q8TF50 670 aaPredicted RBP19.33■□□□□ 0.69
NPHP4-209ENST00000489180 THRAP3Q9Y2W1 955 aaKnown RBP19.33■□□□□ 0.69
NPHP4-209ENST00000489180 GIPC1O14908 333 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 CYP21A2P08686 494 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 POLD1P28340 1107 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 MICAL1Q8TDZ2 1067 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 PTPN22Q9Y2R2 807 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 PHLDB2Q86SQ0 1253 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 HOMER3Q9NSC5 361 aa19.33■□□□□ 0.68
NPHP4-209ENST00000489180 PHKA1P46020 1223 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 FAM98CQ17RN3 349 aaKnown RBP19.32■□□□□ 0.68
NPHP4-209ENST00000489180 LARGE2Q8N3Y3 721 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 CDC23Q9UJX2 597 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 KAZNQ674X7 775 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 NSUN7Q8NE18 718 aaKnown RBP19.32■□□□□ 0.68
NPHP4-209ENST00000489180 RASGRP4Q8TDF6 673 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 A0A1W2PQ27 194 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 A0A1W2PQ64 194 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 A0A1W2PQD8 194 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 SLC39A14Q15043 492 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 GOLGA5Q8TBA6 731 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 DLATP10515 647 aaKnown RBP19.32■□□□□ 0.68
NPHP4-209ENST00000489180 PHKG2P15735 406 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 DEPTORQ8TB45 409 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 TUBGCP2Q9BSJ2 902 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 PLXNC1O60486 1568 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 CLTAP09496 248 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 KRT81Q14533 505 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 PPM1KQ8N3J5 372 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 GREM2Q9H772 168 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 MED4Q9NPJ6 270 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 RIC8AQ9NPQ8 531 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 AFG3L2Q9Y4W6 797 aa19.32■□□□□ 0.68
NPHP4-209ENST00000489180 SARNPP82979 210 aaKnown RBP19.31■□□□□ 0.68
NPHP4-209ENST00000489180 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 NLRX1Q86UT6 975 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 ZNF408Q9H9D4 720 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.31■□□□□ 0.68
NPHP4-209ENST00000489180 BAG2O95816 211 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 RASSF2P50749 326 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 SCNN1DP51172 638 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-209ENST00000489180 RABGGTAQ92696 567 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 GJA10Q969M2 543 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 CCDC127Q96BQ5 260 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 PDE6CP51160 858 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 GRK7Q8WTQ7 553 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 LARGE1O95461 756 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 H2AFZP0C0S5 128 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 LONP1P36776 959 aaKnown RBP19.31■□□□□ 0.68
NPHP4-209ENST00000489180 C2orf54Q08AI8 447 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 H2AFVQ71UI9 128 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 RAB3IPQ96QF0 476 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-209ENST00000489180 NOD1Q9Y239 953 aa19.31■□□□□ 0.68
NPHP4-209ENST00000489180 DDAH1O94760 285 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 CHRNDQ07001 517 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 FAM26FQ5R3K3 315 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 FAM178BQ8IXR5 827 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 XKR9Q5GH70 373 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 ACRBPQ8NEB7 543 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 MYOM2P54296 1465 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 FRMD3A2A2Y4 597 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 SOWAHDA6NJG2 315 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 STAM2O75886 525 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 ADCY1Q08828 1119 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 OTUD6AQ7L8S5 288 aa19.3■□□□□ 0.68
NPHP4-209ENST00000489180 IFNAR2P48551 515 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 LIG4P49917 911 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 LRRC41Q15345 812 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 CCDC125Q86Z20 511 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 ATP2A3Q93084 1043 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 SH2D4BQ5SQS7 431 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms