RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CEP131Q9UPN4 1083 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 CTDP1Q9Y5B0 961 aaPredicted RBP11.48□□□□□ -0.57
USP11-211ENST00000489111 PCDHA1Q9Y5I3 950 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 CLIC4Q9Y696 253 aa11.48□□□□□ -0.57
USP11-211ENST00000489111 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
USP11-211ENST00000489111 ATP2B1P20020 1258 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 HMGCS2P54868 508 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 MAP1SQ66K74 1059 aaPredicted RBP11.47□□□□□ -0.57
USP11-211ENST00000489111 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
USP11-211ENST00000489111 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 ZNF526Q8TF50 670 aaPredicted RBP11.47□□□□□ -0.57
USP11-211ENST00000489111 CUL5Q93034 780 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 SLF1Q9BQI6 1058 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 RPAP3Q9H6T3 665 aaPredicted RBP11.47□□□□□ -0.57
USP11-211ENST00000489111 ZNF408Q9H9D4 720 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
USP11-211ENST00000489111 SCN4AP35499 1836 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 SPTLC2O15270 562 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 GADD45BO75293 160 aaPredicted RBP11.46□□□□□ -0.57
USP11-211ENST00000489111 FLOT1O75955 427 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 BMP15O95972 392 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 MRPL12P52815 198 aaKnown RBP11.46□□□□□ -0.57
USP11-211ENST00000489111 SNAP25P60880 206 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 USH1GQ495M9 461 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 CCDC174Q6PII3 467 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 ERO1BQ86YB8 467 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 LINC00301Q8NCQ3 95 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 SYAP1Q96A49 352 aaPredicted RBP11.46□□□□□ -0.57
USP11-211ENST00000489111 C12orf42Q96LP6 360 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 PSTPIP2Q9H939 334 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 RIC8AQ9NPQ8 531 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.57
USP11-211ENST00000489111 DOCK1Q14185 1865 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 TRAF5O00463 557 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 PPATQ06203 517 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 DGKZQ13574 1117 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 SLC39A14Q15043 492 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 NONOQ15233 471 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP11-211ENST00000489111 MAP3K11Q16584 847 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 TTC38Q5R3I4 469 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
USP11-211ENST00000489111 GPT2Q8TD30 523 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 RANBP17Q9H2T7 1088 aaKnown RBP11.45□□□□□ -0.58
USP11-211ENST00000489111 NMRK2Q9NPI5 230 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 PCDHA6Q9UN73 950 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 AFG3L2Q9Y4W6 797 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 PCDHA8Q9Y5H6 950 aa11.45□□□□□ -0.58
USP11-211ENST00000489111 SPDYE5A6NIY4 337 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 ZBED4O75132 1171 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
USP11-211ENST00000489111 FKBP1BP68106 108 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
USP11-211ENST00000489111 JAKMIP3Q5VZ66 844 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 CAVIN1Q6NZI2 390 aaKnown RBP11.44□□□□□ -0.58
USP11-211ENST00000489111 CCDC73Q6ZRK6 1079 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 MOB2Q70IA6 237 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 CLMNQ96JQ2 1002 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
USP11-211ENST00000489111 BIN2Q9UBW5 565 aaPredicted RBP11.44□□□□□ -0.58
USP11-211ENST00000489111 PNMA2Q9UL42 364 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 PPP1R9AQ9ULJ8 1098 aa11.44□□□□□ -0.58
USP11-211ENST00000489111 MYH4Q9Y623 1939 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 ABCB11O95342 1321 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 UNCXA6NJT0 531 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 M0R2N6 131 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 ADAMTS3O15072 1205 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 PPP6R2O75170 966 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 ICAM1P05362 532 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 FDX1P10109 184 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
USP11-211ENST00000489111 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 PPIL2Q13356 520 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 PTPAQ15257 358 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 UBE2SQ16763 222 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 INF2Q27J81 1249 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
USP11-211ENST00000489111 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 TEX2Q8IWB9 1127 aa11.43□□□□□ -0.58
USP11-211ENST00000489111 KRI1Q8N9T8 703 aaKnown RBP11.43□□□□□ -0.58
USP11-211ENST00000489111 TMEM260Q9NX78 707 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms