RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 TYW1BQ6NUM6 668 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 PPP1R18Q6NYC8 613 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 PHF20Q9BVI0 1012 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 SLC38A10Q9HBR0 1119 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 VPS54Q9P1Q0 977 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 SLC45A1Q9Y2W3 748 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 TCHHQ07283 1943 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 ESYT2A0FGR8 921 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 MMP1P03956 469 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 TRAF1Q13077 416 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 PABPC4Q13310 644 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLDN11-208ENST00000488989 TRIM29Q14134 588 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 NPY5RQ15761 445 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 OTUD7BQ6GQQ9 843 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 LBX2Q6XYB7 198 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 REPS2Q8NFH8 660 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 CCDC148Q8NFR7 591 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
CLDN11-208ENST00000488989 GPKOWQ92917 476 aaPredicted RBP eCLIP18.46■□□□□ 0.55
CLDN11-208ENST00000488989 AMNQ9BXJ7 453 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 HOXC10Q9NYD6 342 aa18.46■□□□□ 0.55
CLDN11-208ENST00000488989 VPS37CA5D8V6 355 aaPredicted RBP18.45■□□□□ 0.54
CLDN11-208ENST00000488989 SPDYE16A6NNV3 312 aaPredicted RBP18.45■□□□□ 0.54
CLDN11-208ENST00000488989 FAM155AB1AL88 458 aaPredicted RBP18.45■□□□□ 0.54
CLDN11-208ENST00000488989 VWA5AO00534 786 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 GUCY1B3Q02153 619 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 GALNT17Q6IS24 598 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 HEATR3Q7Z4Q2 680 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 FBXO11Q86XK2 927 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 BRI3BPQ8WY22 251 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 ATG4CQ96DT6 458 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 ZMYND12Q9H0C1 365 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 PNMA2Q9UL42 364 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 ZNF536O15090 1300 aa18.45■□□□□ 0.54
CLDN11-208ENST00000488989 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 MANSC4A6NHS7 340 aaPredicted RBP18.44■□□□□ 0.54
CLDN11-208ENST00000488989 ATP2A1O14983 1001 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 F13A1P00488 732 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 CALML3P27482 149 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 APLP1P51693 650 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 FOSBP53539 338 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 OAZ1P54368 228 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 SNAP25P60880 206 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 CCL15Q16663 113 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 TEX2Q8IWB9 1127 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 DAGLBQ8NCG7 672 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 COA7Q96BR5 231 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 ASCC2Q9H1I8 757 aaPredicted RBP18.44■□□□□ 0.54
CLDN11-208ENST00000488989 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 ABT1Q9ULW3 272 aaKnown RBP18.44■□□□□ 0.54
CLDN11-208ENST00000488989 KCNJ14Q9UNX9 436 aa18.44■□□□□ 0.54
CLDN11-208ENST00000488989 RBBP6Q7Z6E9 1792 aaKnown RBP18.44■□□□□ 0.54
CLDN11-208ENST00000488989 BTBD19C9JJ37 291 aa18.43■□□□□ 0.54
CLDN11-208ENST00000488989 ZBED4O75132 1171 aa18.43■□□□□ 0.54
CLDN11-208ENST00000488989 ICAM1P05362 532 aa18.43■□□□□ 0.54
CLDN11-208ENST00000488989 NAPAP54920 295 aa18.43■□□□□ 0.54
CLDN11-208ENST00000488989 KIF23Q02241 960 aaPredicted RBP18.43■□□□□ 0.54
CLDN11-208ENST00000488989 RESTQ13127 1097 aa18.43■□□□□ 0.54
CLDN11-208ENST00000488989 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
CLDN11-208ENST00000488989 PCDHA1Q9Y5I3 950 aa18.43■□□□□ 0.54
CLDN11-208ENST00000488989 M0R2N6 131 aa18.42■□□□□ 0.54
CLDN11-208ENST00000488989 OSBPP22059 807 aa18.42■□□□□ 0.54
CLDN11-208ENST00000488989 U2AF2P26368 475 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 NLRP5P59047 1200 aa18.42■□□□□ 0.54
CLDN11-208ENST00000488989 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 MKRN3Q13064 507 aaKnown RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 SAFBQ15424 915 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 DIS3L2Q8IYB7 885 aaKnown RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 MB21D1Q8N884 522 aa18.42■□□□□ 0.54
CLDN11-208ENST00000488989 P2RX7Q99572 595 aaKnown RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 FOXP1Q9H334 677 aaPredicted RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 ZCCHC17Q9NP64 241 aaKnown RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
CLDN11-208ENST00000488989 ZNF214Q9UL59 606 aaPredicted RBP18.42■□□□□ 0.54
CLDN11-208ENST00000488989 PCDHA4Q9UN74 947 aa18.42■□□□□ 0.54
CLDN11-208ENST00000488989 SMCO2A6NFE2 343 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 RASSF10A6NK89 507 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 GNA11P29992 359 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 KRT2P35908 639 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 INHBEP58166 350 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 HERVK_113P62684 666 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 POTEEQ6S8J3 1075 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 GTF3C2Q8WUA4 911 aaPredicted RBP18.41■□□□□ 0.54
CLDN11-208ENST00000488989 TNFRSF25Q93038 417 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 PTPN18Q99952 460 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 GLT8D2Q9H1C3 349 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 C6orf50Q9HD87 102 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 ABCB11O95342 1321 aa18.41■□□□□ 0.54
CLDN11-208ENST00000488989 BTBD18B2RXH4 712 aa18.4■□□□□ 0.54
CLDN11-208ENST00000488989 KIF28PB7ZC32 967 aa18.4■□□□□ 0.54
CLDN11-208ENST00000488989 TMEM132BQ14DG7 1078 aa18.4■□□□□ 0.54
CLDN11-208ENST00000488989 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
CLDN11-208ENST00000488989 BRAPQ7Z569 592 aa18.4■□□□□ 0.54
CLDN11-208ENST00000488989 BLIDQ8IZY5 108 aa18.4■□□□□ 0.54
CLDN11-208ENST00000488989 BRMS1Q9HCU9 246 aa18.4■□□□□ 0.54
CLDN11-208ENST00000488989 RIC8AQ9NPQ8 531 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms