RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 ATP2A1O14983 1001 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 CCDC144BQ3MJ40 725 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 MAMDC4Q6UXC1 1216 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 ARMCX2Q7L311 632 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 CCDC144CPQ8IYA2 1237 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 KLHDC9Q8NEP7 349 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 STARD7Q9NQZ5 370 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 TMEM39AQ9NV64 488 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 ZNF536O15090 1300 aa18.88■□□□□ 0.61
ERGIC3-217ENST00000488935 TSPY2A6NKD2 308 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 RANBP6O60518 1105 aaKnown RBP18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 C6orf222P0C671 652 aaPredicted RBP18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 ALAS1P13196 640 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 RAG1P15918 1043 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 SLC1A4P43007 532 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 BEX3Q00994 111 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 FAAP100Q0VG06 881 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 LRRFIP1Q32MZ4 808 aaKnown RBP18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 EYSQ5T1H1 3165 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 TMEM63BQ5T3F8 832 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 CCSAPQ6IQ19 270 aaPredicted RBP18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 FAM227BQ96M60 508 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 SYNGAP1Q96PV0 1343 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
ERGIC3-217ENST00000488935 PLIN4Q96Q06 1357 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 SOWAHBA6NEL2 793 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 MUM1L1Q5H9M0 696 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 RRP12Q5JTH9 1297 aaKnown RBP18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 C1orf53Q5VUE5 145 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 TTBK2Q6IQ55 1244 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 STAG1Q8WVM7 1258 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 RNF146Q9NTX7 359 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 UNC80Q8N2C7 3258 aa18.86■□□□□ 0.61
ERGIC3-217ENST00000488935 A0A0D9SFI3 127 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 ASGR1P07306 291 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 SLC16A2P36021 539 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 STAT2P52630 851 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 ZNF697Q5TEC3 545 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 NOL8Q76FK4 1167 aaKnown RBP18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 EEPD1Q7L9B9 569 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 CHST13Q8NET6 341 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 KATNBL1Q9H079 304 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 TTYH1Q9H313 450 aaPredicted RBP18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 SEMA6BQ9H3T3 888 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 A1CFQ9NQ94 594 aaKnown RBP18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 TOMM22Q9NS69 142 aa18.85■□□□□ 0.61
ERGIC3-217ENST00000488935 ASTN1O14525 1302 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 KIAA0355O15063 1070 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 DUSP11O75319 330 aaKnown RBP18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 PDE1AP54750 535 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 HAND2P61296 217 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 CCDC96Q2M329 555 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 GNASQ5JWF2 1037 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 CDX2Q99626 313 aaPredicted RBP18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 ACAD9Q9H845 621 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 PDGFCQ9NRA1 345 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 PRR12Q9ULL5 1215 aa18.84■□□□□ 0.61
ERGIC3-217ENST00000488935 FRMPD2Q68DX3 1309 aaPredicted RBP18.83■□□□□ 0.61
ERGIC3-217ENST00000488935 LCTP09848 1927 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 CTAGE5O15320 804 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 FAM109BQ6ICB4 259 aaPredicted RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 RCSD1Q6JBY9 416 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 B4GALNT3Q6L9W6 998 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 ZNF467Q7Z7K2 595 aaPredicted RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 MSL3Q8N5Y2 521 aaKnown RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 FAM133AQ8N9E0 248 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 CHURC1Q8WUH1 139 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 MYLIPQ8WY64 445 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 GMCL1Q96IK5 515 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 RNPC3Q96LT9 517 aaKnown RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 TSEN34Q9BSV6 310 aaKnown RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 LNPKQ9C0E8 428 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 ABHD16BQ9H3Z7 469 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 GPCPD1Q9NPB8 672 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 ZBTB47Q9UFB7 747 aaPredicted RBP18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 FBXO40Q9UH90 709 aa18.83■□□□□ 0.6
ERGIC3-217ENST00000488935 DCDC2CA8MYV0 355 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 OAZ1P54368 228 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 FPGSQ05932 587 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 FAM160B2Q86V87 743 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 NUP133Q8WUM0 1156 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 EVI5LQ96CN4 794 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 PPP1R12CQ9BZL4 782 aa18.82■□□□□ 0.6
ERGIC3-217ENST00000488935 FGAP02671 866 aa18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 ACRP10323 421 aa18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 GJA9P57773 515 aa18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 TNFAIP2Q03169 654 aa18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 ANKRD33Q7Z3H0 272 aa18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 FBXO16Q8IX29 292 aaPredicted RBP18.81■□□□□ 0.6
ERGIC3-217ENST00000488935 GLT1D1Q96MS3 346 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms