RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 RARBP10826 455 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 AKR1A1P14550 325 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 RUFY2Q8WXA3 655 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 SENP6Q9GZR1 1112 aaPredicted RBP16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 HOMER2Q9NSB8 354 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 RNF146Q9NTX7 359 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 PRR12Q9ULL5 1215 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 LRRC37A2A6NM11 1700 aa16.25■□□□□ 0.19
SPTLC1-207ENST00000488921 ZNF536O15090 1300 aa16.24■□□□□ 0.19
SPTLC1-207ENST00000488921 A0A1W2PPC1 479 aa16.24■□□□□ 0.19
SPTLC1-207ENST00000488921 ANO1Q5XXA6 986 aa16.24■□□□□ 0.19
SPTLC1-207ENST00000488921 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
SPTLC1-207ENST00000488921 MYH6P13533 1939 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 ALAS1P13196 640 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 LRRC26Q2I0M4 334 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 GJC2Q5T442 439 aaPredicted RBP16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 SYDE2Q5VT97 1194 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 CCDC174Q6PII3 467 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 BTNL9Q6UXG8 535 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 DGKHQ86XP1 1220 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 AGBL1Q96MI9 1066 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 KRT23Q9C075 422 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 RANBP17Q9H2T7 1088 aaKnown RBP16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 PRO3102Q9H379 93 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 LCTP09848 1927 aa16.23■□□□□ 0.19
SPTLC1-207ENST00000488921 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 ICAM1P05362 532 aa16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 ZNF865P0CJ78 1059 aaPredicted RBP16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 PDHBP11177 359 aa16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 GPATCH4Q5T3I0 446 aaKnown RBP16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 RNF180Q86T96 592 aa16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
SPTLC1-207ENST00000488921 DNAH12Q6ZR08 3092 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 KDM4AO75164 1064 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 SNHG28P0DPA3 235 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 ZNF543Q08ER8 600 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 LRRC41Q15345 812 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 GPCPD1Q9NPB8 672 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 ZHX1Q9UKY1 873 aaPredicted RBP16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
SPTLC1-207ENST00000488921 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 B4E1Z4 1266 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 SNAI1O95863 264 aaPredicted RBP16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 TAL1P17542 331 aaPredicted RBP16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 FAM133AQ8N9E0 248 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 KAT14Q9H8E8 782 aa16.2■□□□□ 0.18
SPTLC1-207ENST00000488921 TRIOBPQ9H2D6 2365 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 ASB14A6NK59 587 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 SYN1P17600 705 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 CHMLP26374 656 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 BMP8BP34820 402 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 SLC16A2P36021 539 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 ATN1P54259 1190 aaPredicted RBP16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 RTP1P59025 263 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 SNAP25P60880 206 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 FGD4Q96M96 766 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 GDF15Q99988 308 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 PRKAG2Q9UGJ0 569 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 RANBP2P49792 3224 aaKnown RBP16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 TNKSO95271 1327 aa16.19■□□□□ 0.18
SPTLC1-207ENST00000488921 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 CNTN2Q02246 1040 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 TRDNQ13061 729 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 NSMFQ6X4W1 530 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 SLC39A5Q6ZMH5 540 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 ANKS1AQ92625 1134 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 IL25Q9H293 177 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 ZSWIM5Q9P217 1185 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 PHF24Q9UPV7 400 aa16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
SPTLC1-207ENST00000488921 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms