RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 TNNI2P48788 182 aa23.08■■□□□ 1.29
NECAB3-213ENST00000488489 ZNF713Q8N859 430 aaPredicted RBP23.08■■□□□ 1.29
NECAB3-213ENST00000488489 ZNF579Q8NAF0 562 aaKnown RBP23.08■■□□□ 1.29
NECAB3-213ENST00000488489 GMCL1Q96IK5 515 aa23.08■■□□□ 1.29
NECAB3-213ENST00000488489 HACL1Q9UJ83 578 aa23.08■■□□□ 1.29
NECAB3-213ENST00000488489 ESYT2A0FGR8 921 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 ZBTB5O15062 677 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 LMNB1P20700 586 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 MCM7P33993 719 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 CAP2P40123 477 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 ATP2C1P98194 919 aaPredicted RBP23.08■■□□□ 1.28
NECAB3-213ENST00000488489 INF2Q27J81 1249 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 KIF4BQ2VIQ3 1234 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 USP49Q70CQ1 688 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 KCNH3Q9ULD8 1083 aa23.08■■□□□ 1.28
NECAB3-213ENST00000488489 KIAA1755Q5JYT7 1200 aa23.07■■□□□ 1.28
NECAB3-213ENST00000488489 SASS6Q6UVJ0 657 aa23.07■■□□□ 1.28
NECAB3-213ENST00000488489 SPICE1Q8N0Z3 855 aa23.07■■□□□ 1.28
NECAB3-213ENST00000488489 BMP15O95972 392 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 TNFAIP1Q13829 316 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
NECAB3-213ENST00000488489 SBF1O95248 1867 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 A0A087WWV3 80 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 PHF20L1A8MW92 1017 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 C4orf32Q8N8J7 132 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 BIN2Q9UBW5 565 aaPredicted RBP23.06■■□□□ 1.28
NECAB3-213ENST00000488489 TMX2Q9Y320 296 aa23.06■■□□□ 1.28
NECAB3-213ENST00000488489 LONRF3Q496Y0 759 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 ANO6Q4KMQ2 910 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 TIGD1Q96MW7 591 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 SYT17Q9BSW7 474 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 IL17AQ16552 155 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 QRICH1Q2TAL8 776 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 DEFB129Q9H1M3 183 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 ARHGEF10LQ9HCE6 1279 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 TMEM260Q9NX78 707 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 SYNPO2Q9UMS6 1093 aa23.05■■□□□ 1.28
NECAB3-213ENST00000488489 TMEM232C9JQI7 657 aa23.04■■□□□ 1.28
NECAB3-213ENST00000488489 BMP3P12645 472 aa23.04■■□□□ 1.28
NECAB3-213ENST00000488489 JAKMIP3Q5VZ66 844 aa23.04■■□□□ 1.28
NECAB3-213ENST00000488489 CCDC84Q86UT8 332 aaPredicted RBP23.04■■□□□ 1.28
NECAB3-213ENST00000488489 REXO1Q8N1G1 1221 aaKnown RBP23.04■■□□□ 1.28
NECAB3-213ENST00000488489 FERMT2Q96AC1 680 aa23.04■■□□□ 1.28
NECAB3-213ENST00000488489 KRT25Q7Z3Z0 450 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 TRPM4Q8TD43 1214 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 EPSTI1Q96J88 318 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 GLIS2Q9BZE0 524 aaPredicted RBP23.03■■□□□ 1.28
NECAB3-213ENST00000488489 GPRC5DQ9NZD1 345 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 KIAA1468Q9P260 1216 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 H7C1D1 291 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 ADCY7P51828 1080 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 SNAP25P60880 206 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 CDC37Q16543 378 aaPredicted RBP23.03■■□□□ 1.28
NECAB3-213ENST00000488489 GLIPR1L2Q4G1C9 344 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 GPC2Q8N158 579 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 DNAJC25Q9H1X3 360 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 FAM13BQ9NYF5 915 aa23.03■■□□□ 1.28
NECAB3-213ENST00000488489 VWA3AA6NCI4 1184 aa23.02■■□□□ 1.28
NECAB3-213ENST00000488489 NONOQ15233 471 aaKnown RBP eCLIP23.02■■□□□ 1.286e-7■■■■□ 23.9
NECAB3-213ENST00000488489 POLR2DO15514 142 aaKnown RBP23.02■■□□□ 1.28
NECAB3-213ENST00000488489 UVSSAQ2YD98 709 aa23.02■■□□□ 1.28
NECAB3-213ENST00000488489 PPP1R18Q6NYC8 613 aa23.02■■□□□ 1.28
NECAB3-213ENST00000488489 KRBA2Q6ZNG9 492 aa23.02■■□□□ 1.28
NECAB3-213ENST00000488489 FAM200AQ8TCP9 573 aa23.02■■□□□ 1.28
NECAB3-213ENST00000488489 RIC8AQ9NPQ8 531 aa23.02■■□□□ 1.28
NECAB3-213ENST00000488489 ASNSP08243 561 aa23.01■■□□□ 1.27
NECAB3-213ENST00000488489 EPS15P42566 896 aa23.01■■□□□ 1.27
NECAB3-213ENST00000488489 NBPF12Q5TAG4 269 aaPredicted RBP23.01■■□□□ 1.27
NECAB3-213ENST00000488489 BTNL9Q6UXG8 535 aa23.01■■□□□ 1.27
NECAB3-213ENST00000488489 TMEM60Q9H2L4 133 aa23.01■■□□□ 1.27
NECAB3-213ENST00000488489 A0A087X0B3 334 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 YBX3P16989 372 aaKnown RBP eCLIP23■■□□□ 1.27
NECAB3-213ENST00000488489 SYDE2Q5VT97 1194 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 ANGEL2Q5VTE6 544 aaKnown RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 PDILTQ8N807 584 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 TBCKQ8TEA7 893 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 SYMPKQ92797 1274 aaKnown RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 R3HCC1Q9Y3T6 440 aaKnown RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 HIRAP54198 1017 aaPredicted RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 IKQ13123 557 aaPredicted RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 ZYXQ15942 572 aaKnown RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 UBE2SQ16763 222 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 C11orf57Q6ZUT1 292 aaPredicted RBP23■■□□□ 1.27
NECAB3-213ENST00000488489 LUZP1Q86V48 1076 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 CNNM3Q8NE01 707 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 CBX8Q9HC52 389 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 PCDHA1Q9Y5I3 950 aa23■■□□□ 1.27
NECAB3-213ENST00000488489 FOXN1O15353 648 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 EDIL3O43854 480 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 CLK2P49760 499 aaKnown RBP22.99■■□□□ 1.27
NECAB3-213ENST00000488489 LETM2Q2VYF4 491 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 FAM83BQ5T0W9 1011 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 PRAMEF18Q5VWM3 479 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 ARL6IP4Q66PJ3 421 aaKnown RBP22.99■■□□□ 1.27
NECAB3-213ENST00000488489 GOPCQ9HD26 462 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 ATAD5Q96QE3 1844 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 PNOCQ13519 176 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 STX1AQ16623 288 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 NEK8Q86SG6 692 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 VCPKMTQ9H867 229 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms