RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 CELF1Q92879 486 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 FAM89AQ96GI7 184 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 GPR101Q96P66 508 aaPredicted RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 HHIPQ96QV1 700 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 RTFDC1Q9BY42 306 aaPredicted RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 ADAM19Q9H013 955 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 ZNF408Q9H9D4 720 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 ADARB2Q9NS39 739 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 LRRC37AA6NMS7 1700 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 PRRT3Q5FWE3 981 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 DUSP27Q5VZP5 1158 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 DLK2Q6UY11 383 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 DMRTC2Q8IXT2 367 aaPredicted RBP8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 PLBD2Q8NHP8 589 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 BSNDQ8WZ55 320 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 TCF12Q99081 682 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 VPS33BQ9H267 617 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 DBNDD1Q9H9R9 158 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 SRA1Q9HD15 236 aaKnown RBP8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
TNFSF4-203ENST00000488053 ELL2O00472 640 aaPredicted RBP8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 PSMD14O00487 310 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 GIPC1O14908 333 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 ECE1P42892 770 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 GPSM2P81274 684 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 TNIP1Q15025 636 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 FAM117BQ6P1L5 589 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 FBXO33Q7Z6M2 555 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 MAP4K3Q8IVH8 894 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 ASAP3Q8TDY4 903 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 JARID2Q92833 1246 aaPredicted RBP8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 FRMD6Q96NE9 622 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 THSD7BQ9C0I4 1608 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 KCNQ5Q9NR82 932 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 POLLQ9UGP5 575 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 CNOT7Q9UIV1 285 aaKnown RBP8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 CASP8AP2Q9UKL3 1982 aa8.16□□□□□ -1.1
TNFSF4-203ENST00000488053 SCN9AQ15858 1988 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 H7C1D1 291 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 APAF1O14727 1248 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 GRM2Q14416 872 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 TBC1D10BQ4KMP7 808 aaPredicted RBP8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 PI16Q6UXB8 463 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 MYD88Q99836 296 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 PHAXQ9H814 394 aaKnown RBP8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 HYPKQ9NX55 129 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 SOX13Q9UN79 622 aa8.15□□□□□ -1.1
TNFSF4-203ENST00000488053 SPEF2Q9C093 1822 aa8.15□□□□□ -1.11
TNFSF4-203ENST00000488053 A0A0A0MRY4 1105 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 H3BRJ5 948 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 ECE2O60344 883 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 HOXB7P09629 217 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 SPATA31C1P0DKV0 1188 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 EPHA1P21709 976 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 SF3B3Q15393 1217 aaKnown RBP8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 TMC4Q7Z404 712 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 SAPCD2Q86UD0 394 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 BCO2Q9BYV7 579 aa8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 SH2B1Q9NRF2 756 aaPredicted RBP8.14□□□□□ -1.11
TNFSF4-203ENST00000488053 RTL9Q8NET4 1388 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 CDHR2Q9BYE9 1310 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 A0A096LPE4 126 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 ADM5C9JUS6 153 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 COL8A1P27658 744 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 GRIA4P48058 902 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 RPS8P62241 208 aaKnown RBP8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 KCNMA1Q12791 1236 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 ADAMTSL4Q6UY14 1074 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 FMR1NBQ8N0W7 255 aaPredicted RBP8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 C8orf58Q8NAV2 365 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 TBC1D16Q8TBP0 767 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 WNT8BQ93098 351 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 ABCB6Q9NP58 842 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 PGAP2Q9UHJ9 254 aa8.13□□□□□ -1.11
TNFSF4-203ENST00000488053 ASTN2O75129 1339 aaPredicted RBP8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 CCDC85CA6NKD9 419 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 METTL12A8MUP2 240 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 UFL1O94874 794 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 ZNF853P0CG23 659 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 ELNP15502 786 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 ITPKAP23677 461 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms