RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-242ENST00000488013 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
HDLBP-242ENST00000488013 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
HDLBP-242ENST00000488013 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-242ENST00000488013 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
HDLBP-242ENST00000488013 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 FDPSP14324 419 aaKnown RBP12.73□□□□□ -0.37
HDLBP-242ENST00000488013 COPB2P35606 906 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 SLC16A2P36021 539 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-242ENST00000488013 KIAA1755Q5JYT7 1200 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 CMTR1Q8N1G2 835 aaKnown RBP12.73□□□□□ -0.37
HDLBP-242ENST00000488013 SAMD3Q8N6K7 520 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 FBXO18Q8NFZ0 1043 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 PARK7Q99497 189 aaKnown RBP12.73□□□□□ -0.37
HDLBP-242ENST00000488013 BARHL2Q9NY43 387 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 CHMP5Q9NZZ3 219 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-242ENST00000488013 ADAMTS5Q9UNA0 930 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
HDLBP-242ENST00000488013 ESYT2A0FGR8 921 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 VWA5AO00534 786 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 ATP2A1O14983 1001 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 STX6O43752 255 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 SYT1P21579 422 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 GJA5P36382 358 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-242ENST00000488013 PKN1Q16512 942 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 DEFB115Q30KQ5 88 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 TKFCQ3LXA3 575 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 PIGSQ96S52 555 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 SLC38A10Q9HBR0 1119 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 C6orf50Q9HD87 102 aa12.72□□□□□ -0.37
HDLBP-242ENST00000488013 ICAM1P05362 532 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
HDLBP-242ENST00000488013 MOGSQ13724 837 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 ASCC2Q9H1I8 757 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-242ENST00000488013 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-242ENST00000488013 MAP3K20Q9NYL2 800 aaKnown RBP12.71□□□□□ -0.37
HDLBP-242ENST00000488013 MRPL11Q9Y3B7 192 aaKnown RBP12.71□□□□□ -0.37
HDLBP-242ENST00000488013 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
HDLBP-242ENST00000488013 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 ABCB11O95342 1321 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 CEP350Q5VT06 3117 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 PDHXO00330 501 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 DDIT3P35638 169 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 NAPAP54920 295 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 NLRP5P59047 1200 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 CCNA1P78396 465 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 TREML2Q5T2D2 321 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-242ENST00000488013 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 MCF2L2Q86YR7 1114 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-242ENST00000488013 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 RABGAP1Q9Y3P9 1069 aa12.7□□□□□ -0.38
HDLBP-242ENST00000488013 POLR2AP24928 1970 aaKnown RBP12.69□□□□□ -0.38
HDLBP-242ENST00000488013 SPDYE16A6NNV3 312 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-242ENST00000488013 FAM155AB1AL88 458 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-242ENST00000488013 BTBD19C9JJ37 291 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 SLC25A27O95847 323 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 MAP2K2P36507 400 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 TM4SF4P48230 202 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 HERVK_113P62684 666 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 GNL2Q13823 731 aaKnown RBP12.69□□□□□ -0.38
HDLBP-242ENST00000488013 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 KRT40Q6A162 431 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 CUL5Q93034 780 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 FOXP1Q9H334 677 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-242ENST00000488013 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
HDLBP-242ENST00000488013 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-242ENST00000488013 STXBP3O00186 592 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 BRD1O95696 1058 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 MMP1P03956 469 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 ZSCAN22P10073 491 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-242ENST00000488013 KRT2P35908 639 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 STAT3P40763 770 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 ADCY7P51828 1080 aa12.68□□□□□ -0.38
HDLBP-242ENST00000488013 MKRN3Q13064 507 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms