RNA–Protein interactions for RNA: ENST00000487720.1

SKAP2-205, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 5

Gene SKAP2, Length 536 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-205ENST00000487720 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
SKAP2-205ENST00000487720 STAT2P52630 851 aa12.38□□□□□ -0.43
SKAP2-205ENST00000487720 GJC2Q5T442 439 aaPredicted RBP12.38□□□□□ -0.43
SKAP2-205ENST00000487720 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
SKAP2-205ENST00000487720 FAM160B2Q86V87 743 aa12.38□□□□□ -0.43
SKAP2-205ENST00000487720 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
SKAP2-205ENST00000487720 TCP11L1Q9NUJ3 509 aa12.38□□□□□ -0.43
SKAP2-205ENST00000487720 SNAI1O95863 264 aaPredicted RBP12.37□□□□□ -0.43
SKAP2-205ENST00000487720 SYN1P17600 705 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 MAGEA10P43363 369 aaPredicted RBP12.37□□□□□ -0.43
SKAP2-205ENST00000487720 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
SKAP2-205ENST00000487720 LRRC41Q15345 812 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 FGD4Q96M96 766 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 FBXO40Q9UH90 709 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
SKAP2-205ENST00000487720 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
SKAP2-205ENST00000487720 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 RARBP10826 455 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 TOP1P11387 765 aaKnown RBP12.36□□□□□ -0.43
SKAP2-205ENST00000487720 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
SKAP2-205ENST00000487720 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
SKAP2-205ENST00000487720 HAND2P61296 217 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 SNX17Q15036 470 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
SKAP2-205ENST00000487720 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 CWC27Q6UX04 472 aaKnown RBP12.36□□□□□ -0.43
SKAP2-205ENST00000487720 SLC39A5Q6ZMH5 540 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 KCTD1Q719H9 257 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 AGBL1Q96MI9 1066 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
SKAP2-205ENST00000487720 KBTBD13C9JR72 458 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 ADCYAP1R1P41586 468 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 BTNL9Q6UXG8 535 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 TBC1D10CQ8IV04 446 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 TTC14Q96N46 770 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 TOMM22Q9NS69 142 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 PHF24Q9UPV7 400 aa12.35□□□□□ -0.43
SKAP2-205ENST00000487720 HIP1O00291 1037 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 PGK1P00558 417 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 AKR1A1P14550 325 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 PDE4AP27815 886 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 RTP1P59025 263 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 SNAP25P60880 206 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 CNTN2Q02246 1040 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
SKAP2-205ENST00000487720 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 TTBK2Q6IQ55 1244 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 ABHD16BQ9H3Z7 469 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
SKAP2-205ENST00000487720 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 DIAPH3Q9NSV4 1193 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
SKAP2-205ENST00000487720 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
SKAP2-205ENST00000487720 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
SKAP2-205ENST00000487720 LAMA3Q16787 3333 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 SOX1O00570 391 aaPredicted RBP12.33□□□□□ -0.44
SKAP2-205ENST00000487720 ZNF213O14771 459 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 ICAM1P05362 532 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 SNHG28P0DPA3 235 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 PDHBP11177 359 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 NT5C2P49902 561 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 CCSAPQ6IQ19 270 aaPredicted RBP12.33□□□□□ -0.44
SKAP2-205ENST00000487720 RNF180Q86T96 592 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 LENG1Q96BZ8 264 aaPredicted RBP12.33□□□□□ -0.44
SKAP2-205ENST00000487720 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
SKAP2-205ENST00000487720 DSCC1Q9BVC3 393 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 KATNBL1Q9H079 304 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
SKAP2-205ENST00000487720 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
SKAP2-205ENST00000487720 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
SKAP2-205ENST00000487720 DUSP11O75319 330 aaKnown RBP12.32□□□□□ -0.44
SKAP2-205ENST00000487720 ALAS1P13196 640 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 SLC16A2P36021 539 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 CCDC96Q2M329 555 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 LRIT3Q3SXY7 679 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
SKAP2-205ENST00000487720 ARMCX2Q7L311 632 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms